Daily Papers

Large language models often produce plausible numerical claims from financial filings while using the wrong reporting period, unit, line item, or formula. Verifying such claims requires more than rechecking arithmetic: a verifier must ground the relevant facts, establish the authorized calculation, and determine whether the candidate value follows from both. We propose VeriFin, a neurosymbolic verification framework for numerical financial question answering that grounds operands in filed XBRL facts, derives calculations from the question, filing linkbases, or documented metric definitions, and checks claims using Z3. When a claim is inconsistent, solver-derived unsatisfiable cores identify the conflicting facts, formula, and candidate value, enabling targeted repair. We evaluate VeriFin on XBRLFiling, a new 600-question benchmark constructed from 10-K filings of 28 U.S. companies, and on FinanceBench. On fixed candidate pools shared by all verification methods, VeriFin accepts none of the incorrect claims, whereas the baselines accept 6 to 92 incorrect claims on XBRLFiling's 600 claims and 4 to 21 incorrect claims on FinanceBench's 67 claims. The zero false-accept result persists across multiple answer-generator models. Solver-derived feedback further improves repair, achieving up to 69.9% recovery among true catches. These results show that source-grounded symbolic verification can provide a reliable and auditable acceptance control for LLM-generated financial claims.

Neurosymbolic (NeSy) frameworks combine neural representations and learning with symbolic representations and reasoning. Combining the reasoning capacities, explainability, and interpretability of symbolic processing with the flexibility and power of neural computing allows us to solve complex problems with more reliability while being data-efficient. However, this recently growing topic poses a challenge to developers with its learning curve, lack of user-friendly tools, libraries, and unifying frameworks. In this paper, we characterize the technical facets of existing NeSy frameworks, such as the symbolic representation language, integration with neural models, and the underlying algorithms. A majority of the NeSy research focuses on algorithms instead of providing generic frameworks for declarative problem specification to leverage problem solving. To highlight the key aspects of Neurosymbolic modeling, we showcase three generic NeSy frameworks - DeepProbLog, Scallop, and DomiKnowS. We identify the challenges within each facet that lay the foundation for identifying the expressivity of each framework in solving a variety of problems. Building on this foundation, we aim to spark transformative action and encourage the community to rethink this problem in novel ways.

Large Language Models (LLMs) achieve strong performance on natural language tasks but remain unreliable in mathematical reasoning, frequently generating fluent yet logically inconsistent solutions. We present NeuroProlog, a neurosymbolic framework that ensures verifiable reasoning by compiling math word problems into executable Prolog programs with formal verification guarantees. We propose a multi-task Cocktail training strategy that jointly optimizes three synergistic objectives in a unified symbolic representation space: (i) mathematical formula-to-rule translation (KB), (ii) natural language-to-program synthesis (SOLVE), and (iii) program-answer alignment. This joint supervision enables positive transfer, where symbolic grounding in formula translation directly improves compositional reasoning capabilities. At inference, we introduce an execution-guided decoding pipeline with fine-grained error taxonomy that enables iterative program repair and quantifies model self-debugging capacity. Comprehensive evaluation on GSM8K across four model scales (3B--32B parameters) demonstrates consistent improvements: cocktail training achieves significant accuracy gains of +5.23\% (Qwen-32B, p < 0.01), +3.43\% (GPT-OSS-20B, p < 0.01), and +5.54\% (Llama-3B, p < 0.05) over single-task baselines. Systematic error analysis reveals scale-dependent learning dynamics: at 32B scale, cocktail training transforms unfixable type errors (12\% repair rate) into correctable domain errors (96\% repair rate), achieving 92.7\% overall correction; at 8B scale, the same training eliminates syntactic errors but introduces semantic failures, revealing a critical capacity threshold for type-safe symbolic reasoning.

Large Language Models perform well at natural language interpretation and reasoning, but their inherent stochasticity limits their adoption in regulated industries like finance and healthcare that operate under strict policies. To address this limitation, we present a two-stage neurosymbolic framework that (1) uses LLMs with optional human guidance to formalize natural language policies, allowing fine-grained control of the formalization process, and (2) uses inference-time autoformalization to validate logical correctness of natural language statements against those policies. When correctness is paramount, we perform multiple redundant formalization steps at inference time, cross checking the formalizations for semantic equivalence. Our benchmarks demonstrate that our approach exceeds 99% soundness, indicating a near-zero false positive rate in identifying logical validity. Our approach produces auditable logical artifacts that substantiate the verification outcomes and can be used to improve the original text.

We introduce Cosmos, a framework for object-centric world modeling that is designed for compositional generalization (CG), i.e., high performance on unseen input scenes obtained through the composition of known visual "atoms." The central insight behind Cosmos is the use of a novel form of neurosymbolic grounding. Specifically, the framework introduces two new tools: (i) neurosymbolic scene encodings, which represent each entity in a scene using a real vector computed using a neural encoder, as well as a vector of composable symbols describing attributes of the entity, and (ii) a neurosymbolic attention mechanism that binds these entities to learned rules of interaction. Cosmos is end-to-end differentiable; also, unlike traditional neurosymbolic methods that require representations to be manually mapped to symbols, it computes an entity's symbolic attributes using vision-language foundation models. Through an evaluation that considers two different forms of CG on an established blocks-pushing domain, we show that the framework establishes a new state-of-the-art for CG in world modeling.

Parallel neurosymbolic architectures have been applied effectively in NLP by distilling knowledge from a logic theory into a deep model.However, prior art faces several limitations including supporting restricted forms of logic theories and relying on the assumption of independence between the logic and the deep network. We present Concordia, a framework overcoming the limitations of prior art. Concordia is agnostic both to the deep network and the logic theory offering support for a wide range of probabilistic theories. Our framework can support supervised training of both components and unsupervised training of the neural component. Concordia has been successfully applied to tasks beyond NLP and data classification, improving the accuracy of state-of-the-art on collective activity detection, entity linking and recommendation tasks.

Large multimodal models have demonstrated impressive problem-solving abilities in vision and language tasks, and have the potential to encode extensive world knowledge. However, it remains an open challenge for these models to perceive, reason, plan, and act in realistic environments. In this work, we introduce Can-Do, a benchmark dataset designed to evaluate embodied planning abilities through more diverse and complex scenarios than previous datasets. Our dataset includes 400 multimodal samples, each consisting of natural language user instructions, visual images depicting the environment, state changes, and corresponding action plans. The data encompasses diverse aspects of commonsense knowledge, physical understanding, and safety awareness. Our fine-grained analysis reveals that state-of-the-art models, including GPT-4V, face bottlenecks in visual perception, comprehension, and reasoning abilities. To address these challenges, we propose NeuroGround, a neurosymbolic framework that first grounds the plan generation in the perceived environment states and then leverages symbolic planning engines to augment the model-generated plans. Experimental results demonstrate the effectiveness of our framework compared to strong baselines. Our code and dataset are available at https://embodied-planning.github.io.

Recent advancements in large language models have showcased their remarkable generalizability across various domains. However, their reasoning abilities still have significant room for improvement, especially when confronted with scenarios requiring multi-step reasoning. Although large language models possess extensive knowledge, their behavior, particularly in terms of reasoning, often fails to effectively utilize this knowledge to establish a coherent thinking paradigm. Generative language models sometimes show hallucinations as their reasoning procedures are unconstrained by logical principles. Aiming to improve the zero-shot chain-of-thought reasoning ability of large language models, we propose Logical Chain-of-Thought (LogiCoT), a neurosymbolic framework that leverages principles from symbolic logic to verify and revise the reasoning processes accordingly. Experimental evaluations conducted on language tasks in diverse domains, including arithmetic, commonsense, symbolic, causal inference, and social problems, demonstrate the efficacy of the enhanced reasoning paradigm by logic.

Despite the syntactic fluency of Large Language Models (LLMs), ensuring their logical correctness in high-stakes domains remains a fundamental challenge. We present a neurosymbolic framework that combines LLMs with SMT solvers to produce verification-guided answers through iterative refinement. Our approach decomposes LLM outputs into atomic claims, autoformalizes them into first-order logic, and verifies their logical consistency using automated theorem proving. We introduce three key innovations: (1) multi-model consensus via formal semantic equivalence checking to ensure logic-level alignment between candidates, eliminating the syntactic bias of surface-form metrics, (2) semantic routing that directs different claim types to appropriate verification strategies: symbolic solvers for logical claims and LLM ensembles for commonsense reasoning, and (3) precise logical error localization via Minimal Correction Subsets (MCS), which pinpoint the exact subset of claims to revise, transforming binary failure signals into actionable feedback. Our framework classifies claims by their logical status and aggregates multiple verification signals into a unified score with variance-based penalty. The system iteratively refines answers using structured feedback until acceptance criteria are met or convergence is achieved. This hybrid approach delivers formal guarantees where possible and consensus verification elsewhere, advancing trustworthy AI. With the GPT-OSS-120B model, VERGE demonstrates an average performance uplift of 18.7% at convergence across a set of reasoning benchmarks compared to single-pass approaches.

Relational databases are central to modern data management, yet most data exists in unstructured forms like text documents. To bridge this gap, we leverage large language models (LLMs) to automatically synthesize a relational database by generating its schema and populating its tables from raw text. We introduce SQUiD, a novel neurosymbolic framework that decomposes this task into four stages, each with specialized techniques. Our experiments show that SQUiD consistently outperforms baselines across diverse datasets. Our code and datasets are publicly available at: https://github.com/Mushtari-Sadia/SQUiD.

Logic Tensor Networks (LTN) provide a neurosymbolic framework in which first-order logic is interpreted through tensor operations, enabling logical constraints to be integrated with differentiable learning. However, the original formulation of LTN is primarily suited to data represented as flat collections of individuals, and does not explicitly capture structural organization such as temporal order, sequential position, or graph connectivity. We introduce sLTN, an extension of LTN that makes structural dimensions first-class elements of the language. Structural dimensions represent named tensor axes associated with domain-specific organization, such as time steps, sequence positions, or graph nodes. They can be quantified explicitly, related through structural relations, and used to express temporal, sequential, and relational constraints directly at the logical level. We formalize the syntax and fuzzy tensor semantics of sLTN and show that, in the absence of structural dimensions, the framework recovers the original LTN semantics as a special case. We further describe a PyTorch implementation based on a declarative signature, formula parsing, and tensorial interpretation. The framework is illustrated on representative temporal and sequential reasoning examples. This paper serves as a companion to the sltn library, available at https://github.com/logictensornetworks/sltn.

While large language models (LLMs) now excel at code generation, a key aspect of software development is the art of refactoring: consolidating code into libraries of reusable and readable programs. In this paper, we introduce LILO, a neurosymbolic framework that iteratively synthesizes, compresses, and documents code to build libraries tailored to particular problem domains. LILO combines LLM-guided program synthesis with recent algorithmic advances in automated refactoring from Stitch: a symbolic compression system that efficiently identifies optimal lambda abstractions across large code corpora. To make these abstractions interpretable, we introduce an auto-documentation (AutoDoc) procedure that infers natural language names and docstrings based on contextual examples of usage. In addition to improving human readability, we find that AutoDoc boosts performance by helping LILO's synthesizer to interpret and deploy learned abstractions. We evaluate LILO on three inductive program synthesis benchmarks for string editing, scene reasoning, and graphics composition. Compared to existing neural and symbolic methods - including the state-of-the-art library learning algorithm DreamCoder - LILO solves more complex tasks and learns richer libraries that are grounded in linguistic knowledge.

The synergy between symbolic knowledge, often represented by Knowledge Graphs (KGs), and the generative capabilities of neural networks is central to advancing neurosymbolic AI. A primary bottleneck in realizing this potential is the difficulty of automating KG construction, which faces challenges related to output reliability, consistency, and verifiability. These issues can manifest as structural inconsistencies within the generated graphs, such as the formation of disconnected isolated islands of data or the inaccurate conflation of abstract classes with specific instances. To address these challenges, we propose HyDRA, a Hybrid-Driven Reasoning Architecture designed for verifiable KG automation. Given a domain or an initial set of documents, HyDRA first constructs an ontology via a panel of collaborative neurosymbolic agents. These agents collaboratively agree on a set of competency questions (CQs) that define the scope and requirements the ontology must be able to answer. Given these CQs, we build an ontology graph that subsequently guides the automated extraction of triplets for KG generation from arbitrary documents. Inspired by design-by-contracts (DbC) principles, our method leverages verifiable contracts as the primary control mechanism to steer the generative process of Large Language Models (LLMs). To verify the output of our approach, we extend beyond standard benchmarks and propose an evaluation framework that assesses the functional correctness of the resulting KG by leveraging symbolic verifications as described by the neurosymbolic AI framework, SymbolicAI. This work contributes a hybrid-driven architecture for improving the reliability of automated KG construction and the exploration of evaluation methods for measuring the functional integrity of its output. The code is publicly available.

We contribute a theoretical and operational framework for neurosymbolic AI called DeepLog. DeepLog introduces building blocks and primitives for neurosymbolic AI that make abstraction of commonly used representations and computational mechanisms used in neurosymbolic AI. DeepLog can represent and emulate a wide range of neurosymbolic systems. It consists of two key components. The first is the DeepLog language for specifying neurosymbolic models and inference tasks. This language consists of an annotated neural extension of grounded first-order logic, and makes abstraction of the type of logic, e.g. boolean, fuzzy or probabilistic, and whether logic is used in the architecture or in the loss function. The second DeepLog component is situated at the computational level and uses extended algebraic circuits as computational graphs. Together these two components are to be considered as a neurosymbolic abstract machine, with the DeepLog language as the intermediate level of abstraction and the circuits level as the computational one. DeepLog is implemented in software, relies on the latest insights in implementing algebraic circuits on GPUs, and is declarative in that it is easy to obtain different neurosymbolic models by making different choices for the underlying algebraic structures and logics. The generality and efficiency of the DeepLog neurosymbolic machine is demonstrated through an experimental comparison between 1) different fuzzy and probabilistic logics, 2) between using logic in the architecture or in the loss function, and 3) between a standalone CPU-based implementation of a neurosymbolic AI system and a DeepLog GPU-based one.

Retrieval Augmented Generation (RAG) has made significant strides in overcoming key limitations of large language models, such as hallucination, lack of contextual grounding, and issues with transparency. However, traditional RAG systems consist of three interconnected neural components - the retriever, re-ranker, and generator - whose internal reasoning processes remain opaque. This lack of transparency complicates interpretability, hinders debugging efforts, and erodes trust, especially in high-stakes domains where clear decision-making is essential. To address these challenges, we introduce the concept of Neurosymbolic RAG, which integrates symbolic reasoning using a knowledge graph with neural retrieval techniques. This new framework aims to answer two primary questions: (a) Can retrievers provide a clear and interpretable basis for document selection? (b) Can symbolic knowledge enhance the clarity of the retrieval process? We propose three methods to improve this integration. First is MAR (Knowledge Modulation Aligned Retrieval) that employs modulation networks to refine query embeddings using interpretable symbolic features, thereby making document matching more explicit. Second, KG-Path RAG enhances queries by traversing knowledge graphs to improve overall retrieval quality and interpretability. Lastly, Process Knowledge-infused RAG utilizes domain-specific tools to reorder retrieved content based on validated workflows. Preliminary results from mental health risk assessment tasks indicate that this neurosymbolic approach enhances both transparency and overall performance

We present a framework for the unsupervised learning of neurosymbolic encoders, which are encoders obtained by composing neural networks with symbolic programs from a domain-specific language. Our framework naturally incorporates symbolic expert knowledge into the learning process, which leads to more interpretable and factorized latent representations compared to fully neural encoders. We integrate modern program synthesis techniques with the variational autoencoding (VAE) framework, in order to learn a neurosymbolic encoder in conjunction with a standard decoder. The programmatic descriptions from our encoders can benefit many analysis workflows, such as in behavior modeling where interpreting agent actions and movements is important. We evaluate our method on learning latent representations for real-world trajectory data from animal biology and sports analytics. We show that our approach offers significantly better separation of meaningful categories than standard VAEs and leads to practical gains on downstream analysis tasks, such as for behavior classification.

A recent approach to neurosymbolic reasoning is to explicitly combine the strengths of large language models (LLMs) and symbolic solvers to tackle complex reasoning tasks. However, current approaches face significant limitations, including poor generalizability due to task-specific prompts, inefficiencies caused by the lack of separation between knowledge and queries, and restricted inferential capabilities. These shortcomings hinder their scalability and applicability across diverse domains. In this paper, we introduce VERUS-LM, a novel framework designed to address these challenges. VERUS-LM employs a generic prompting mechanism, clearly separates domain knowledge from queries, and supports a wide range of different logical reasoning tasks. This framework enhances adaptability, reduces computational cost, and allows for richer forms of reasoning, such as optimization and constraint satisfaction. We show that our approach succeeds in diverse reasoning on a novel dataset, markedly outperforming LLMs. Additionally, our system achieves competitive results on common reasoning benchmarks when compared to other state-of-the-art approaches, and significantly surpasses them on the difficult AR-LSAT dataset. By pushing the boundaries of hybrid reasoning, VERUS-LM represents a significant step towards more versatile neurosymbolic AI systems

We study the problem of combining neural networks with symbolic reasoning. Recently introduced frameworks for Probabilistic Neurosymbolic Learning (PNL), such as DeepProbLog, perform exponential-time exact inference, limiting the scalability of PNL solutions. We introduce Approximate Neurosymbolic Inference (A-NeSI): a new framework for PNL that uses neural networks for scalable approximate inference. A-NeSI 1) performs approximate inference in polynomial time without changing the semantics of probabilistic logics; 2) is trained using data generated by the background knowledge; 3) can generate symbolic explanations of predictions; and 4) can guarantee the satisfaction of logical constraints at test time, which is vital in safety-critical applications. Our experiments show that A-NeSI is the first end-to-end method to solve three neurosymbolic tasks with exponential combinatorial scaling. Finally, our experiments show that A-NeSI achieves explainability and safety without a penalty in performance.

We present PixCell, a neurosymbolic system in which multimodal agents convert a visually presented photonic component into a parametric program over a small domain-specific language (DSL) of geometric primitives. A system enabling deterministic visual verification renders evaluation asymmetrically cheaper than the generation attempt. While models using multi-seed sampling and iterative revision reach a mean best-turn IoU of only 0.416, multimodal agents through PixCell's interface and verifier consistently exceed 0.9 mean IoU, with scores reaching 0.974 and 0.955 across eight component targets while also satisfying source contracts. These results demonstrate that frontier multimodal agents can reliably understand and render executable parametric representations from visual targets. Using these live parameters, cross-stack studies on an interferometer reconstruct primitive programs that satisfy an 8.0 nm free spectral range target and the original footprint constraint on modeled 220-nm SOI, 400-nm SiN, and 400-nm TFLN stacks. PixCell further carries a paper-derived splitter from visual reconstruction through SOI full-wave simulation, producing symmetric propagation and balanced outputs. Finally, the same executable verifier supplies a training reward and dataset used to train a Qwen3.6-35B-A3B model with LoRA and GRPO without supervised demonstrations. On eight training-excluded paper figures, its mean champion IoU rises from 0.422 after eight initial attempts to 0.491 after three verifier-guided revision rounds. These results therefore establish a controlled framework for measuring, retargeting, and improving visual-to-parametric photonic component design.

Accurate translation from Natural Language to First-Order Logic (NL-to-FOL) underpins neurosymbolic AI systems and Natural Language Inference (NLI), making the quality of NL-to-FOL benchmarks essential -- yet these datasets have never been rigorously audited. Our first contribution is to present a systematic human inspection of the validation split of FOLIO and a subset of MALLS test instances, finding that approximately 39% and 36% of entries, respectively, contain incorrect FOL formalizations (i.e., ground truth labels), with additional rates of ambiguous NL sentences (16.4% and 48%) and incorrect NLI labels in FOLIO (8.4%). Our second contribution is to develop and release corrected ground truths for such datasets, showing that annotation errors distort model evaluation on a reference benchmark task: testing three state-of-the-art LLMs (Gemma~4 31B-it, Qwen3-30B-A3B, and GPT-4o-mini) with the corrected ground truths yields accuracy gains from +9 to +22 percentage points. Motivated by these findings, we propose an LLM-based framework to support humans in manual reviewing NL-to-FOL datasets. By directing reviewers toward the most error-prone instances, we empirically show that it is possible to achieve 90% dataset accuracy after reviewing fewer than 24% of instances, compared to over 70% required by unguided review. We release all human-verified annotations and the code for our framework.

Can we build accurate world models out of large language models (LLMs)? How can world models benefit LLM agents? The gap between the prior knowledge of LLMs and the specified environment's dynamics usually bottlenecks LLMs' performance as world models. To bridge the gap, we propose a training-free "world alignment" that learns an environment's symbolic knowledge complementary to LLMs. The symbolic knowledge covers action rules, knowledge graphs, and scene graphs, which are extracted by LLMs from exploration trajectories and encoded into executable codes to regulate LLM agents' policies. We further propose an RL-free, model-based agent "WALL-E 2.0" through the model-predictive control (MPC) framework. Unlike classical MPC requiring costly optimization on the fly, we adopt an LLM agent as an efficient look-ahead optimizer of future steps' actions by interacting with the neurosymbolic world model. While the LLM agent's strong heuristics make it an efficient planner in MPC, the quality of its planned actions is also secured by the accurate predictions of the aligned world model. They together considerably improve learning efficiency in a new environment. On open-world challenges in Mars (Minecraft like) and ALFWorld (embodied indoor environments), WALL-E 2.0 significantly outperforms existing methods, e.g., surpassing baselines in Mars by 16.1%-51.6% of success rate and by at least 61.7% in score. In ALFWorld, it achieves a new record 98% success rate after only 4 iterations.

Efforts to improve Large Language Model (LLM) agent performance on complex tasks have largely focused on fine-tuning and iterative self-correction. However, these approaches often lack generalizable mechanisms for longterm learning and remain inefficient in dynamic environments. We introduce OmniReflect, a hierarchical, reflection-driven framework that constructs a constitution, a compact set of guiding principles distilled from task experiences, to enhance the effectiveness and efficiency of an LLM agent. OmniReflect operates in two modes: Self-sustaining, where a single agent periodically curates its own reflections during task execution, and Co-operative, where a Meta-advisor derives a constitution from a small calibration set to guide another agent. To construct these constitutional principles, we employ Neural, Symbolic, and NeuroSymbolic techniques, offering a balance between contextual adaptability and computational efficiency. Empirical results averaged across models show major improvements in task success, with absolute gains of +10.3% on ALFWorld, +23.8% on BabyAI, and +8.3% on PDDL in the Self-sustaining mode. Similar gains are seen in the Co-operative mode, where a lightweight Qwen3-4B ReAct agent outperforms all Reflexion baselines on BabyAI. These findings highlight the robustness and effectiveness of OmniReflect across environments and backbones.

Supervised approaches for learning spatio-temporal scene graphs (STSG) from video are greatly hindered due to their reliance on STSG-annotated videos, which are labor-intensive to construct at scale. Is it feasible to instead use readily available video captions as weak supervision? To address this question, we propose LASER, a neuro-symbolic framework to enable training STSG generators using only video captions. LASER employs large language models to first extract logical specifications with rich spatio-temporal semantic information from video captions. LASER then trains the underlying STSG generator to align the predicted STSG with the specification. The alignment algorithm overcomes the challenges of weak supervision by leveraging a differentiable symbolic reasoner and using a combination of contrastive, temporal, and semantics losses. The overall approach efficiently trains low-level perception models to extract a fine-grained STSG that conforms to the video caption. In doing so, it enables a novel methodology for learning STSGs without tedious annotations. We evaluate our method on three video datasets: OpenPVSG, 20BN, and MUGEN. Our approach demonstrates substantial improvements over fully-supervised baselines, achieving a unary predicate prediction accuracy of 27.78% (+12.65%) and a binary recall@5 of 0.42 (+0.22) on OpenPVSG. Additionally, LASER exceeds baselines by 7% on 20BN and 5.2% on MUGEN in terms of overall predicate prediction accuracy.

The Scholarly Question Answering over Linked Data (Scholarly QALD) at The International Semantic Web Conference (ISWC) 2023 challenge presents two sub-tasks to tackle question answering (QA) over knowledge graphs (KGs). We answer the KGQA over DBLP (DBLP-QUAD) task by proposing a neuro-symbolic (NS) framework based on PSYCHIC, an extractive QA model capable of identifying the query and entities related to a KG question. Our system achieved a F1 score of 00.18% on question answering and came in third place for entity linking (EL) with a score of 71.00%.

Modern artificial intelligence excels at statistical interpolation within seen manifolds but fundamentally fails at the exact reasoning required for theoretical physics and mathematics. We identify the "Float Wall" -- a catastrophic collapse of neural extrapolation at scales beyond 10^{16} -- caused by standard floating-point representation and linguistic tokenization (BPE). To resolve this, we introduce the Active Discoverer Framework, a digit-native neuro-symbolic architecture designed for invariant discovery. At its core is NumberNet, a Siamese Arithmetic Transformer that utilizes least-significant-bit (LSB) sequence encoding to achieve 0% precision loss and cosmic-scale extrapolation up to 10^{50}. To enforce physical grounding, we implement a Hamiltonian-based energy descent and Symmetry Grouping layer, ensuring the model respects Noether's theorem natively. The primary innovation is the Symbolic LaTeX Bottleneck: an active discovery loop where the model is forced to hypothesize unknown physical variables through an autoregressive LaTeX decoder. By reconciling numeric "hallucinations" with structurally valid mathematical expressions, the framework ensures that any discovered physics is parsimonious and human-interpretable. We evaluate this system against a 30-billion scale benchmark and the Universal Physics Pantheon, featuring 50 "Chaos Mode" systemic perturbations. Our results demonstrate that while traditional GBDT and LLM-based architectures collapse at cosmic scales, the Active Discoverer autonomously deduces universal constants such as the Gravitational Constant (G) with high fidelity. This framework establishes a path toward zero-hallucination artificial intelligence and truly autonomous scientific research agents.

This paper addresses the problem of autonomous UAV search missions, where a UAV must locate specific Entities of Interest (EOIs) within a time limit, based on brief descriptions in large, hazard-prone environments with keep-out zones. The UAV must perceive, reason, and make decisions with limited and uncertain information. We propose NEUSIS, a compositional neuro-symbolic system designed for interpretable UAV search and navigation in realistic scenarios. NEUSIS integrates neuro-symbolic visual perception, reasoning, and grounding (GRiD) to process raw sensory inputs, maintains a probabilistic world model for environment representation, and uses a hierarchical planning component (SNaC) for efficient path planning. Experimental results from simulated urban search missions using AirSim and Unreal Engine show that NEUSIS outperforms a state-of-the-art (SOTA) vision-language model and a SOTA search planning model in success rate, search efficiency, and 3D localization. These results demonstrate the effectiveness of our compositional neuro-symbolic approach in handling complex, real-world scenarios, making it a promising solution for autonomous UAV systems in search missions.

Modern Vision-Language Models (VLMs) have achieved impressive performance in various tasks, yet they often struggle with compositional reasoning, the ability to decompose and recombine concepts to solve novel problems. While neuro-symbolic approaches offer a promising direction, they are typically constrained by crisp logical execution or predefined predicates, which limit flexibility. In this work, we introduce NePTune, a neuro-symbolic framework that overcomes these limitations through a hybrid execution model that integrates the perception capabilities of foundation vision models with the compositional expressiveness of symbolic reasoning. NePTune dynamically translates natural language queries into executable Python programs that blend imperative control flow with soft logic operators capable of reasoning over VLM-generated uncertainty. Operating in a training-free manner, NePTune, with a modular design, decouples perception from reasoning, yet its differentiable operations support fine-tuning. We evaluate NePTune on multiple visual reasoning benchmarks and various domains, utilizing adversarial tests, and demonstrate a significant improvement over strong base models, as well as its effective compositional generalization and adaptation capabilities in novel environments.

Building a conversational embodied agent to execute real-life tasks has been a long-standing yet quite challenging research goal, as it requires effective human-agent communication, multi-modal understanding, long-range sequential decision making, etc. Traditional symbolic methods have scaling and generalization issues, while end-to-end deep learning models suffer from data scarcity and high task complexity, and are often hard to explain. To benefit from both worlds, we propose JARVIS, a neuro-symbolic commonsense reasoning framework for modular, generalizable, and interpretable conversational embodied agents. First, it acquires symbolic representations by prompting large language models (LLMs) for language understanding and sub-goal planning, and by constructing semantic maps from visual observations. Then the symbolic module reasons for sub-goal planning and action generation based on task- and action-level common sense. Extensive experiments on the TEACh dataset validate the efficacy and efficiency of our JARVIS framework, which achieves state-of-the-art (SOTA) results on all three dialog-based embodied tasks, including Execution from Dialog History (EDH), Trajectory from Dialog (TfD), and Two-Agent Task Completion (TATC) (e.g., our method boosts the unseen Success Rate on EDH from 6.1\% to 15.8\%). Moreover, we systematically analyze the essential factors that affect the task performance and also demonstrate the superiority of our method in few-shot settings. Our JARVIS model ranks first in the Alexa Prize SimBot Public Benchmark Challenge.

Analytical solutions to differential equations offer exact, interpretable insight but are rarely available because discovering them requires expert intuition or exhaustive search of combinatorial spaces. We introduce SIGS, a neuro-symbolic framework for equation-driven closed-form solution discovery. SIGS uses a context-free grammar to generate mathematically valid and physically meaningful building blocks, with a user-specified Ansatz prescribing how these blocks combine, embeds them into a topology-regularised continuous latent manifold, and searches this manifold in two stages: structure selection followed by coefficient refinement using gradient descent, scoring candidates only against the PDE residual and prescribed boundary and initial conditions. This design unifies symbolic reasoning with numerical optimization; the grammar constrains candidate solution blocks to be proper by construction, while the latent search makes exploration tractable and data-free. SIGS is the first neuro-symbolic method to (i) recover analytical solutions for coupled nonlinear PDE systems, (ii) discover equivalent symbolic forms when the grammar lacks the natural primitives, and (iii) produce accurate symbolic approximations for PDEs lacking known closed-form solutions. Overall, SIGS improves over existing symbolic methods by orders of magnitude in both accuracy and runtime across standard PDE benchmarks.

While tool-augmented Large Language Models have significantly improved multi-step reasoning in quantitative STEM tasks, a critical residual failure mode remains: intermediate reasoning steps that are syntactically well-formed, mathematically executable, and unit-consistent, yet contextually ungrounded. Current approaches either rely on formal verifiers that cannot assess semantic intent, or burden Process Reward Models (PRMs) with the dual task of checking both arithmetic and logic. In this paper, we propose a neuro-symbolic framework that cleanly decouples reasoning into two formal dimensions: Symbolic Validity (V) and Semantic Groundedness (G). We guarantee V by construction using a deterministic symbolic verifier acting as a hard filter. To assess G, we train a PRM conditionally on the verifier-accepted manifold. To train this PRM efficiently, we introduce Counterfactual Symbolic Perturbation (CSP), a novel data synthesis strategy that algorithmically generates constraint-preserving hard negatives (steps that perfectly pass the verifier but are logically flawed). At inference, we deploy a verifier-first constrained search that guarantees execution consistency for verifier-covered operations while relying on the PRM solely to rank semantic grounding. By targeting the exact residual error class of strong tool-using LLMs, our method significantly improves reasoning reliability without the sprawling heuristics of prior frameworks.

Visual reasoning, particularly spatial reasoning, is a challenging cognitive task that requires understanding object relationships and their interactions within complex environments, especially in robotics domain. Existing vision_language models (VLMs) excel at perception tasks but struggle with fine-grained spatial reasoning due to their implicit, correlation-driven reasoning and reliance solely on images. We propose a novel neuro_symbolic framework that integrates both panoramic-image and 3D point cloud information, combining neural perception with symbolic reasoning to explicitly model spatial and logical relationships. Our framework consists of a perception module for detecting entities and extracting attributes, and a reasoning module that constructs a structured scene graph to support precise, interpretable queries. Evaluated on the JRDB-Reasoning dataset, our approach demonstrates superior performance and reliability in crowded, human_built environments while maintaining a lightweight design suitable for robotics and embodied AI applications.

Understanding and reasoning over complex spreadsheets remain fundamental challenges for large language models (LLMs), which often struggle with accurately capturing the complex structure of tables and ensuring reasoning correctness. In this work, we propose SheetBrain, a neuro-symbolic dual workflow agent framework designed for accurate reasoning over tabular data, supporting both spreadsheet question answering and manipulation tasks. SheetBrain comprises three core modules: an understanding module, which produces a comprehensive overview of the spreadsheet - including sheet summary and query-based problem insight to guide reasoning; an execution module, which integrates a Python sandbox with preloaded table-processing libraries and an Excel helper toolkit for effective multi-turn reasoning; and a validation module, which verifies the correctness of reasoning and answers, triggering re-execution when necessary. We evaluate SheetBrain on multiple public tabular QA and manipulation benchmarks, and introduce SheetBench, a new benchmark targeting large, multi-table, and structurally complex spreadsheets. Experimental results show that SheetBrain significantly improves accuracy on both existing benchmarks and the more challenging scenarios presented in SheetBench. Our code is publicly available at https://github.com/microsoft/SheetBrain.

As AI agents become increasingly autonomous, widely deployed in consequential contexts, and efficacious in bringing about real-world impacts, ensuring that their decisions are not only instrumentally effective but also normatively aligned has become critical. We introduce a neuro-symbolic reason-based containment architecture, Governor for Reason-Aligned ContainmEnt (GRACE), that decouples normative reasoning from instrumental decision-making and can contain AI agents of virtually any design. GRACE restructures decision-making into three modules: a Moral Module (MM) that determines permissible macro actions via deontic logic-based reasoning; a Decision-Making Module (DMM) that encapsulates the target agent while selecting instrumentally optimal primitive actions in accordance with derived macro actions; and a Guard that monitors and enforces moral compliance. The MM uses a reason-based formalism providing a semantic foundation for deontic logic, enabling interpretability, contestability, and justifiability. Its symbolic representation enriches the DMM's informational context and supports formal verification and statistical guarantees of alignment enforced by the Guard. We demonstrate GRACE on an example of a LLM therapy assistant, showing how it enables stakeholders to understand, contest, and refine agent behavior.

Large language models (LLMs) are highly capable at language generation, but they remain unreliable when reasoning requires explicit symbolic structure, multi-step inference, and interpretable uncertainty. This paper presents a neuro-symbolic framework for translating natural-language reasoning problems into executable formal representations using first-order logic (FOL) and Narsese, the language of the Non-Axiomatic Reasoning System (NARS). To support this direction, we introduce NARS-Reasoning-v0.1, a benchmark of natural-language reasoning problems paired with FOL forms, executable Narsese programs, and three gold labels: True, False, and Uncertain. We develop a deterministic compilation pipeline from FOL to executable Narsese and validate retained examples through runtime execution in OpenNARS for Applications (ONA), ensuring that the symbolic targets are not only syntactically well formed but also behaviorally aligned with the intended answer. We further present Language-Structured Perception (LSP), a formulation in which an LLM is trained to produce reasoning-relevant symbolic structure rather than only a final verbal response. As an initial proof of concept, we also train and release a Phi-2 LoRA adapter on NARS-Reasoning-v0.1 for three-label reasoning classification, showing that the benchmark can support supervised adaptation in addition to executable evaluation. Overall, the paper positions executable symbolic generation and execution-based validation as a practical path toward more reliable neuro-symbolic reasoning systems.

As LLM-based agents increasingly operate in high-stakes domains with real-world consequences, ensuring their behavioral safety becomes paramount. The dominant oversight paradigm, LLM-as-a-Judge, faces a fundamental dilemma: how can probabilistic systems reliably supervise other probabilistic systems without inheriting their failure modes? We argue that formal verification offers a principled escape from this dilemma, yet its adoption has been hindered by a critical bottleneck: the translation from natural language requirements to formal specifications. This paper bridges this gap by proposing , a neuro-symbolic framework that employs a bidirectional Formal-of-Thought architecture: LLMs serve as specification compilers that top-down decompose high-level human intent into atomic, verifiable constraints, then bottom-up prove compliance using Dafny specifications and Z3 Satisfiability modulo theories solving, which produces mathematical guarantees rather than probabilistic scores. We validate across three benchmarks spanning behavioral safety, multi-domain constraint adherence, and agentic upward deception detection. Experiments on 7 agent models demonstrate that achieves an average improvement of 16.6% over LLM-as-a-Judge baselines, enables weak-to-strong generalization where a 7B judge achieves over 90% accuracy detecting deception from 72B agents, and provides near-linear safety improvement through iterative refinement.

Precise recognition of search intent in Retrieval-Augmented Generation (RAG) systems remains a challenging goal, especially under resource constraints and for complex queries with nested structures and dependencies. This paper presents QCompiler, a neuro-symbolic framework inspired by linguistic grammar rules and compiler design, to bridge this gap. It theoretically designs a minimal yet sufficient Backus-Naur Form (BNF) grammar G[q] to formalize complex queries. Unlike previous methods, this grammar maintains completeness while minimizing redundancy. Based on this, QCompiler includes a Query Expression Translator, a Lexical Syntax Parser, and a Recursive Descent Processor to compile queries into Abstract Syntax Trees (ASTs) for execution. The atomicity of the sub-queries in the leaf nodes ensures more precise document retrieval and response generation, significantly improving the RAG system's ability to address complex queries.

Personal Artificial Intelligence is currently hindered by the fragmentation of user data across isolated silos. While Retrieval-Augmented Generation offers a partial remedy, its reliance on unstructured vector similarity fails to capture the latent semantic topology and temporal dependencies essential for holistic sensemaking. We introduce EpisTwin, a neuro-symbolic framework that grounds generative reasoning in a verifiable, user-centric Personal Knowledge Graph. EpisTwin leverages Multimodal Language Models to lift heterogeneous, cross-application data into semantic triples. At inference, EpisTwin enables complex reasoning over the personal semantic graph via an agentic coordinator that combines Graph Retrieval-Augmented Generation with Online Deep Visual Refinement, dynamically re-grounding symbolic entities in their raw visual context. We also introduce PersonalQA-71-100, a synthetic benchmark designed to simulate a realistic user's digital footprint and evaluate EpisTwin performance. Our framework demonstrates robust results across a suite of state-of-the-art judge models, offering a promising direction for trustworthy Personal AI.

Flexible robotic automation requires systems that interpret operator intent, verify physical feasibility, and recover from execution failures across both the planning and execution stages. This paper proposes an agentic neuro-symbolic framework for human-in-the-loop industrial robotics, in which LLMs are used for tasks that require language understanding or contextual reasoning, while all verification, sequencing, and execution remain deterministic. The framework adapts the Planner-Generator-Evaluator (PGE) harness pattern from software engineering into a Specifier-Designer-Inspector (SDI) architecture for industrial robotics, combined with LangGraph-based dynamic routing for failure recovery. A two-tier recovery mechanism addresses structure-level replanning through context-aware orchestration and execution-level geometric failures through deterministic recovery skills. A Unity3D digital twin supports human inspection, modification, and re-verification prior to physical execution. Evaluated on natural-language commands across multiple difficulty levels against ten baselines, the proposed method achieves the highest task success. Ablation results confirm that structured command expansion, symbolic verification, selective LLM routing, and recovery skills are each individually necessary.

We propose NEURONA, a neuro-symbolic framework for fMRI decoding and concept grounding in neural activity. Leveraging image- and video-based fMRI question-answering datasets, NEURONA learns to decode interacting concepts from visual stimuli based on patterns of fMRI responses, integrating symbolic reasoning and compositional execution with fMRI grounding across brain regions. We demonstrate that incorporating structural priors (e.g., compositional predicate-argument dependencies between concepts) into the decoding process significantly improves both decoding accuracy over precise queries, and notably, generalization to unseen queries at test time. With NEURONA, we highlight neuro-symbolic frameworks as promising tools for understanding neural activity.

This paper proposes a neuro-symbolic framework for G-code generation that seeks to integrate the neural generative capabilities of the GLLM method (Abdelaal et al., 2025) with formal verification via a Separation Logic (SL) prover. To establish a reliable physical baseline, the framework extracts deterministic boundary representations from 3D CAD models (STEP files) using the OpenCASCADE framework. This extracted geometric data supports a two-component architecture: the LLM serves as an initial code generator, while the SL Prover, utilizing a Spatial Heap model, evaluates the output. By conceptualizing physical collisions as logical Spatial Data Races -- violations of the separating conjunction in SL -- our framework translates proof failures into structured mathematical feedback. These failures are condensed into bounding boxes that serve as directives for the LLM's iterative self-correction. Ultimately, this work aims to develop a self-correcting system that reduces the need for human supervision, leading to safer and verified autonomous manufacturing.

Large vision-language models have achieved strong performance in multimodal reasoning, but they remain unreliable on fine-grained spatial tasks that demand both precise spatial perception and fine-grained geometric computation beyond end-to-end generation. Tool augmentation offers a natural solution, while existing methods either plan tool calls from scratch without explicit dependency constraints or rely on fixed pipelines that are redundant and generalize poorly across spatial tasks. An effective spatial reasoning agent should instead accumulate reusable experience and adaptively compose it for new problems. To this end, we propose NeSy-Spatial, a neuro-symbolic framework for self-evolving spatial skills. NeSy-Spatial abstracts tool interactions and geometric operations into typed executable atomic instructions and composes them into two complementary skill types: Tool-Use Skills for organizing tool execution and Geometry Skills for structured geometric reasoning. During inference, NeSy-Spatial retrieves and executes relevant skills in a closed-loop process. During evolution, it analyzes buffered successful and failed trajectories to refine skill structures and prune unreliable or inactive entries. Experiments on three spatial reasoning benchmarks show that NeSy-Spatial consistently improves reasoning accuracy with more precise tool utilization.

Compositional generalization is crucial for artificial intelligence agents to solve complex vision-language reasoning tasks. Neuro-symbolic approaches have demonstrated promise in capturing compositional structures, but they face critical challenges: (a) reliance on predefined predicates for symbolic representations that limit adaptability, (b) difficulty in extracting predicates from raw data, and (c) using non-differentiable operations for combining primitive concepts. To address these issues, we propose NeSyCoCo, a neuro-symbolic framework that leverages large language models (LLMs) to generate symbolic representations and map them to differentiable neural computations. NeSyCoCo introduces three innovations: (a) augmenting natural language inputs with dependency structures to enhance the alignment with symbolic representations, (b) employing distributed word representations to link diverse, linguistically motivated logical predicates to neural modules, and (c) using the soft composition of normalized predicate scores to align symbolic and differentiable reasoning. Our framework achieves state-of-the-art results on the ReaSCAN and CLEVR-CoGenT compositional generalization benchmarks and demonstrates robust performance with novel concepts in the CLEVR-SYN benchmark.

The Korean criminal justice system utilizes summary proceedings (guyaksik) to expedite high-volume minor infractions, such as simple driving under the influence (DUI), unlicensed driving, and minor traffic casualties. Although this mechanism improves judicial throughput, processing these cases creates a substantial administrative burden for prosecutors, driving the need for automated systems that can precisely translate unstructured legal text into deterministic statutory outcomes. While recent Large Language Models (LLMs) excel at semantic extraction, their probabilistic nature inherently limits their reliability in Legal Judgment Prediction tasks. Specifically, when confronted with the arithmetic constraints of legal statutes, LLMs can produce hallucinations. Given that legal accountability permits virtually no tolerance for stochastic errors, purely neural architectures remain limited in their direct judicial applications. To address these limitations, we propose a Neuro-Symbolic framework that bridges unstructured legal facts with formal verification. Our architecture restricts the LLM exclusively to semantic extraction, while offloading statutory fine calculations to a Satisfiability Modulo Theories solver. This division of labor reduces hallucination risks during computation. Furthermore, we incorporate a Human-in-the-Loop verification scheme to preserve professional legal oversight. We formalize the 2026 Sentencing Guidelines for Traffic Offenses within this pipeline, demonstrating a deterministic approach to supporting summary indictments.

Large Language Models (LLMs) show promise for automated code repair but often struggle with the complex semantic and structural correctness required. We present SynthFix, a hybrid neural-symbolic framework that improves LLM-based vulnerability repair by unifying code synthesis with compiler-informed symbolic feedback. The core of our approach is an adaptive training strategy where a neural Router Model directs code samples to either Supervised Fine-Tuning (SFT) to learn common patterns or Reward Fine-Tuning (RFT) with symbolic rewards for complex, iterative refinement. On the FixJS (JavaScript) and CodeFlaws (C) benchmarks, SynthFix achieves up to 18% relative improvement in CodeBLEU/CrystalBLEU and 32% in Exact Match over strong SFT and RFT baselines. Our results show that this adaptive combination of training strategies, which mirrors how developers alternate between pattern application and tool feedback, significantly improves the accuracy and efficiency of LLM-based vulnerability repair. Our code and data are available at https://github.com/CoderDoge1108/SynthFix.

Evaluations of large language models (LLMs) primarily emphasize convergent logical reasoning, where success is defined by producing a single correct proof. However, many real-world reasoning problems admit multiple valid derivations, requiring models to explore diverse logical paths rather than committing to one route. To address this limitation, we introduce LogicGraph, the first benchmark aimed to systematically evaluate multi-path logical reasoning, constructed via a neuro-symbolic framework that leverages backward logic generation and semantic instantiation. This pipeline yields solver-verified reasoning problems formalized by high-depth multi-path reasoning and inherent logical distractions, where each instance is associated with an exhaustive set of minimal proofs. We further propose a reference-free evaluation framework to rigorously assess model performance in both convergent and divergent regimes. Experiments on state-of-the-art language models reveal a common limitation: models tend to commit early to a single route and fail to explore alternatives, and the coverage gap grows substantially with reasoning depth. LogicGraph exposes this divergence gap and provides actionable insights to motivate future improvements. Our code and data will be released at https://github.com/kkkkarry/LogicGraph.

Large language models (LLMs) increasingly serve as data-driven reasoners, yet their chains-of-thought (CoT) can be unfaithful even when final answers are correct. Most existing ``verification'' signals are not diagnostic: answer matching observes only the outcome, LLM-as-judge provides subjective and non-verifiable critiques, and scalar rewards (e.g., PRMs/RMs) offer little insight into where a multi-step derivation fails.We propose SymDiag, a neuro-symbolic framework that reframes reasoning verification as structured failure diagnosis. SymDiag translates natural-language CoT into symbolic constraints and performs step-level satisfiability/entailment checks to (i) localize failing steps and (ii) produce verifiable diagnostic evidence, including counterexamples, inconsistency witnesses, and missing-premise indicators. A central challenge is that apparent ``logic violations'' can be caused either by genuine reasoning defects or by neural-to-symbolic translation noise. SymDiag therefore incorporates a Self-Auditor that disentangles TranslationError from ReasoningError via dual symbolic encodings consistency checks, enabling robust diagnosis under partial observability. Across diverse mathematical, logical, scientific, and general reasoning benchmarks, SymDiag improves detection of unfaithful reasoning and provides substantially more effective feedback for multi-round reasoning repair than outcome-only verification and LLM-based judging, offering a principled foundation for trustworthy and scalable reasoning diagnosis.

Natural language explanations represent a proxy for evaluating explanation-based and multi-step Natural Language Inference (NLI) models. However, assessing the validity of explanations for NLI is challenging as it typically involves the crowd-sourcing of apposite datasets, a process that is time-consuming and prone to logical errors. To address existing limitations, this paper investigates the verification and refinement of natural language explanations through the integration of Large Language Models (LLMs) and Theorem Provers (TPs). Specifically, we present a neuro-symbolic framework, named Explanation-Refiner, that integrates TPs with LLMs to generate and formalise explanatory sentences and suggest potential inference strategies for NLI. In turn, the TP is employed to provide formal guarantees on the logical validity of the explanations and to generate feedback for subsequent improvements. We demonstrate how Explanation-Refiner can be jointly used to evaluate explanatory reasoning, autoformalisation, and error correction mechanisms of state-of-the-art LLMs as well as to automatically enhance the quality of explanations of variable complexity in different domains.

Recent advancements, such as DeepSeek-Prover-V2-671B and Kimina-Prover-Preview-72B, demonstrate a prevailing trend in leveraging reinforcement learning (RL)-based large-scale training for automated theorem proving. Surprisingly, we discover that even without any training, careful neuro-symbolic coordination of existing off-the-shelf reasoning models and tactic step provers can achieve comparable performance. This paper introduces DSP+, an improved version of the Draft, Sketch, and Prove framework, featuring a fine-grained and integrated neuro-symbolic enhancement for each phase: (1) In the draft phase, we prompt reasoning models to generate concise natural-language subgoals to benefit the sketch phase, removing thinking tokens and references to human-written proofs; (2) In the sketch phase, subgoals are autoformalized with hypotheses to benefit the proving phase, and sketch lines containing syntactic errors are masked according to predefined rules; (3) In the proving phase, we tightly integrate symbolic search methods like Aesop with step provers to establish proofs for the sketch subgoals. Experimental results show that, without any additional model training or fine-tuning, DSP+ solves 80.7\%, 32.8\%, and 24 out of 644 problems from miniF2F, ProofNet, and PutnamBench, respectively, while requiring fewer budgets compared to state-of-the-arts. DSP+ proves imo\_2019\_p1, an IMO problem in miniF2F that is not solved by any prior work. Additionally, DSP+ generates proof patterns comprehensible by human experts, facilitating the identification of formalization errors; For example, eight wrongly formalized statements in miniF2F are discovered. Our results highlight the potential of classical reasoning patterns besides the RL-based training. All components will be open-sourced.

Recent work has shown that integrating large language models (LLMs) with theorem provers (TPs) in neuro-symbolic pipelines helps with entailment verification and proof-guided refinement of explanations for natural language inference (NLI). However, scaling such refinement to naturalistic NLI remains difficult: long, syntactically rich inputs and deep multi-step arguments amplify autoformalisation errors, where a single local mismatch can invalidate the proof. Moreover, current methods often handle failures via costly global regeneration due to the difficulty of localising the responsible span or step from prover diagnostics. Aiming to address these problems, we propose a decompose-and-formalise framework that (i) decomposes premise-hypothesis pairs into an entailment tree of atomic steps, (ii) verifies the tree bottom-up to isolate failures to specific nodes, and (iii) performs local diagnostic-guided refinement instead of regenerating the whole explanation. Moreover, to improve faithfulness of autoformalisation, we introduce θ-substitution in an event-based logical form to enforce consistent argument-role bindings. Across a range of reasoning tasks using five LLM backbones, our method achieves the highest explanation verification rates, improving over the state-of-the-art by 26.2%, 21.7%, 21.6% and 48.9%, while reducing refinement iterations and runtime and preserving strong NLI accuracy.

The ability to transform a flat sheet into a complex three-dimensional structure is a fundamental test of physical intelligence. Unlike cloth manipulation, origami is governed by strict geometric axioms and hard kinematic constraints, where a single invalid crease or collision can invalidate the entire folding sequence. As a result, origami demands long-horizon constructive reasoning that jointly satisfies precise physical laws and high-level semantic intent. Existing approaches fall into two disjoint paradigms: optimization-based methods enforce physical validity but require dense, precisely specified inputs, making them unsuitable for sparse natural language descriptions, while generative foundation models excel at semantic and perceptual synthesis yet fail to produce long-horizon, physics-consistent folding processes. Consequently, generating valid origami folding sequences directly from text remains an open challenge. To address this gap, we introduce Learn2Fold, a neuro-symbolic framework that formulates origami folding as conditional program induction over a crease-pattern graph. Our key insight is to decouple semantic proposal from physical verification. A large language model generates candidate folding programs from abstract text prompts, while a learned graph-structured world model serves as a differentiable surrogate simulator that predicts physical feasibility and failure modes before execution. Integrated within a lookahead planning loop, Learn2Fold enables robust generation of physically valid folding sequences for complex and out-of-distribution patterns, demonstrating that effective spatial intelligence arises from the synergy between symbolic reasoning and grounded physical simulation.

Large Multimodal Models (LMMs) often struggle with geometric reasoning due to visual hallucinations and a lack of mathematically precise Chain-of-Thought (CoT) data. To address this, we propose the GeoSym Engine, an automated and scalable neuro-symbolic framework. By leveraging a type-conditional grammar and an analytic SymGT Solver, it derives exact symbolic ground truths and seamlessly integrates with a robust rendering pipeline to produce high-precision geometric diagrams. Using this engine, we construct GeoSym127K, a difficulty-stratified dataset featuring 51K high-resolution images, 127K questions with symbolic ground truths, and 55K answer-verified CoT QA pairs. We also introduce GeoSym-Bench, an expert-curated suite of 511 complex samples for rigorous evaluation. Through extensive supervised fine-tuning (SFT), we demonstrate that GeoSym drives concentrated improvements specifically on diagram-dependent and multi-step geometry tasks. Our Qwen3-VL-8B model gains an absolute +22.21% on the MathVerse Vision-Only subset and reaches 61.52% (+6.19% improvement) on WeMath, mitigating long-horizon logic fragmentation and outperforming advanced closed-source models like Doubao-1.8. Furthermore, applying Reinforcement Learning with Verifiable Rewards (RLVR) via GRPO reveals that initializing from structural SFT checkpoints substantially elevates the performance ceiling over zero-shot RL. Driven by deterministic exact-match signals, this showcases the robust scaling potential of our verifiable reasoning synthesis. Datasets and code are available at https://huggingface.co/datasets/Tomie0506/GeoSym127K and https://github.com/Tomie56/GeoSym127K.

Test-time scaling has enabled Large Language Models (LLMs) to tackle complex reasoning, yet the limitations of current Chain-of-Thought (CoT) evaluation obscures whether performance gains stem from genuine reasoning or mere verbosity. To address this, (1) we propose a novel neuro-symbolic framework for the non-intrusive, comprehensive process-centric evaluation of reasoning. (2) Through this lens, we identify four distinct behavioral prototypes and diagnose the failure modes. (3) We examine the impact of inference mode, training strategy, and model scale. Our analysis reveals that extended token generation is not a prerequisite for deep reasoning. Furthermore, we reveal critical constraints: mixing long and short CoT data in training risks in premature saturation and collapse, while distillation into smaller models captures behavioral length but fails to replicate logical efficacy due to intrinsic capacity limits.

Automated proving of polynomial inequalities is a fundamental challenge in automated mathematical reasoning, where rich algebraic structure and a rapidly growing certificate search space hinder scalability. Purely symbolic approaches provide strong guarantees but often scale poorly as the number of variables or the degree increases, due to expensive algebraic manipulations and rapidly growing intermediate expressions. In parallel, LLM-guided methods have made notable progress, particularly on competition-style inequalities with a small number of variables. To address the remaining scalability challenges, we propose NSPI, a neuro-symbolic framework that combines the complementary strengths of LLMs and symbolic computation for polynomial-inequality proving. Concretely, an LLM proposes a conjecture in the form of an approximate polynomial Sum-Of-Squares (SOS) decomposition; we refine it via symbolic computation to obtain an exact polynomial SOS representation, which directly proves the target inequality, and we further certify the proof in Lean, yielding an end-to-end pipeline from heuristic discovery to machine-checked proof. Experiments on challenging benchmarks involving polynomials with up to 10 variables demonstrate the effectiveness and scalability of the proposed method.

Large Language Models (LLMs) have demonstrated remarkable proficiency in natural language understanding, yet they struggle with strict multi-step reasoning, frequently suffering from hallucinations and inconsistency. Existing solutions like Chain-of-Thought (CoT) lack rigorous verification mechanisms, while standard Retrieval-Augmented Generation (RAG) often misses the complex, structural dependencies inherent in logical tasks. To bridge this gap, we propose a Neuro-Symbolic architecture that integrates a Logical Knowledge Graph (LKG) with dynamic solver routing. Specifically, we introduce an ontology-based LKG that treats logical rules and constraints as first-class topological nodes, enabling explicit modeling of dependencies extracted from text. We further design a Logic Router to dynamically dispatch tasks to the optimal symbolic engine, which is supported by a topology-aware hybrid retrieval mechanism. Experimental results on logical reasoning benchmarks demonstrate that our framework significantly outperforms state-of-the-art prompting and RAG baselines, delivering higher accuracy and verifiable reasoning paths.

Large language model (LLM)-based multi-agent systems enable expressive agent reasoning but are expensive to scale and poorly calibrated for timestep-aligned state-transition simulation, while classical agent-based models (ABMs) offer interpretability but struggle to integrate rich individual-level signals and non-stationary behaviors. We propose PhysicsAgentABM, which shifts inference to behaviorally coherent agent clusters: state-specialized symbolic agents encode mechanistic transition priors, a multimodal neural transition model captures temporal and interaction dynamics, and uncertainty-aware epistemic fusion yields calibrated cluster-level transition distributions. Individual agents then stochastically realize transitions under local constraints, decoupling population inference from entity-level variability. We further introduce ANCHOR, an LLM agent-driven clustering strategy based on cross-contextual behavioral responses and a novel contrastive loss, reducing LLM calls by up to 6-8 times. Experiments across public health, finance, and social sciences show consistent gains in event-time accuracy and calibration over mechanistic, neural, and LLM baselines. By re-architecting generative ABM around population-level inference with uncertainty-aware neuro-symbolic fusion, PhysicsAgentABM establishes a new paradigm for scalable and calibrated simulation with LLMs.

Automating Infrastructure-as-Code (IaC) is challenging, and large language models (LLMs) often produce incorrect configurations from natural language (NL). We present TerraFormer, a neuro-symbolic framework for IaC generation and mutation that combines supervised fine-tuning with verifier-guided reinforcement learning, using formal verification tools to provide feedback on syntax, deployability, and policy compliance. We curate two large, high-quality NL-to-IaC datasets, TF-Gen (152k instances) and TF-Mutn (52k instances), via multi-stage verification and iterative LLM self-correction. Evaluations against 17 state-of-the-art LLMs, including ~50x larger models like Sonnet 3.7, DeepSeek-R1, and GPT-4.1, show that TerraFormer improves correctness over its base LLM by 15.94% on IaC-Eval, 11.65% on TF-Gen (Test), and 19.60% on TF-Mutn (Test). It outperforms larger models on both TF-Gen (Test) and TF-Mutn (Test), ranks third on IaC-Eval, and achieves top best-practices and security compliance.

What if accessing the web did not require a screen, a stable desk, or even free hands? For people navigating crowded cities, living with low vision, or experiencing cognitive overload, smart glasses coupled with AI agents could turn the web into an always-on assistive layer over daily life. We present Egocentric Co-Pilot, a web-native neuro-symbolic framework that runs on smart glasses and uses a Large Language Model (LLM) to orchestrate a toolbox of perception, reasoning, and web tools. An egocentric reasoning core combines Temporal Chain-of-Thought with Hierarchical Context Compression to support long-horizon question answering and decision support over continuous first-person video, far beyond a single model's context window. Additionally, a lightweight multimodal intent layer maps noisy speech and gaze into structured commands. We further implement and evaluate a cloud-native WebRTC pipeline integrating streaming speech, video, and control messages into a unified channel for smart glasses and browsers. In parallel, we deploy an on-premise WebSocket baseline, exposing concrete trade-offs between local inference and cloud offloading in terms of latency, mobility, and resource use. Experiments on Egolife and HD-EPIC demonstrate competitive or state-of-the-art egocentric QA performance, and a human-in-the-loop study on smart glasses shows higher task completion and user satisfaction than leading commercial baselines. Taken together, these results indicate that web-connected egocentric co-pilots can be a practical path toward more accessible, context-aware assistance in everyday life. By grounding operation in web-native communication primitives and modular, auditable tool use, Egocentric Co-Pilot offers a concrete blueprint for assistive, always-on web agents that support education, accessibility, and social inclusion for people who may benefit most from contextual, egocentric AI.

While Large Language Models (LLMs) can solve many NLP tasks in zero-shot settings, applications involving embodied agents remain problematic. In particular, complex plans that require multi-step reasoning become difficult and too costly as the context window grows. Planning requires understanding the likely effects of one's actions and identifying whether the current environment satisfies the goal state. While symbolic planners find optimal solutions quickly, they require a complete and accurate representation of the planning problem, severely limiting their use in practical scenarios. In contrast, modern LLMs cope with noisy observations and high levels of uncertainty when reasoning about a task. Our work presents LLM Dynamic Planner (LLM-DP): a neuro-symbolic framework where an LLM works hand-in-hand with a traditional planner to solve an embodied task. Given action-descriptions, LLM-DP solves Alfworld faster and more efficiently than a naive LLM ReAct baseline.

Recent studies of the applications of conversational AI tools, such as chatbots powered by large language models, to complex real-world knowledge work have shown limitations related to reasoning and multi-step problem solving. Specifically, while existing chatbots simulate shallow reasoning and understanding they are prone to errors as problem complexity increases. The failure of these systems to address complex knowledge work is due to the fact that they do not perform any actual cognition. In this position paper, we present Cognitive AI, a higher-level framework for implementing programmatically defined neuro-symbolic cognition above and outside of large language models. Specifically, we propose a dual-layer functional architecture for Cognitive AI that serves as a roadmap for AI systems that can perform complex multi-step knowledge work. We propose that Cognitive AI is a necessary precursor for the evolution of higher forms of AI, such as AGI, and specifically claim that AGI cannot be achieved by probabilistic approaches on their own. We conclude with a discussion of the implications for large language models, adoption cycles in AI, and commercial Cognitive AI development.

The transcriptional response to genetic perturbation reveals fundamental insights into complex cellular systems. While current approaches have made progress in predicting genetic perturbation responses, they provide limited biological understanding and cannot systematically refine existing knowledge. Overcoming these limitations requires an end-to-end integration of data-driven learning and existing knowledge. However, this integration is challenging due to inconsistencies between data and knowledge bases, such as noise, misannotation, and incompleteness. To address this challenge, we propose ALIGNED (Adaptive aLignment for Inconsistent Genetic kNowledgE and Data), a neuro-symbolic framework based on the Abductive Learning (ABL) paradigm. This end-to-end framework aligns neural and symbolic components and performs systematic knowledge refinement. We introduce a balanced consistency metric to evaluate the predictions' consistency against both data and knowledge. Our results show that ALIGNED outperforms state-of-the-art methods by achieving the highest balanced consistency, while also re-discovering biologically meaningful knowledge. Our work advances beyond existing methods to enable both the transparency and the evolution of mechanistic biological understanding.

Natural Language Querying for Time Series Databases (NLQ4TSDB) aims to assist non-expert users retrieve meaningful events, intervals, and summaries from massive temporal records. However, existing Text-to-SQL methods are not designed for continuous morphological intents such as shapes or anomalies, while time series models struggle to handle ultra-long histories. To address these challenges, we propose Sonar-TS, a neuro-symbolic framework that tackles NLQ4TSDB via a Search-Then-Verify pipeline. Analogous to active sonar, it utilizes a feature index to ping candidate windows via SQL, followed by generated Python programs to lock on and verify candidates against raw signals. To enable effective evaluation, we introduce NLQTSBench, the first large-scale benchmark designed for NLQ over TSDB-scale histories. Our experiments highlight the unique challenges within this domain and demonstrate that Sonar-TS effectively navigates complex temporal queries where traditional methods fail. This work presents the first systematic study of NLQ4TSDB, offering a general framework and evaluation standard to facilitate future research.

Self-supervised learning excels at learning representations from large amounts of data. At the same time, generative models offer the complementary property of learning information about the underlying data generation process. In this study, we aim at establishing a principled connection between these two paradigms and highlight the benefits of their complementarity. In particular, we perform an analysis of self-supervised learning objectives, elucidating the underlying probabilistic graphical models and presenting a standardized methodology for their derivation from first principles. The analysis suggests a natural means of integrating self-supervised learning with likelihood-based generative models. We instantiate this concept within the realm of cluster-based self-supervised learning and energy models, introducing a lower bound proven to reliably penalize the most important failure modes and unlocking full unification. Our theoretical findings are substantiated through experiments on synthetic and real-world data, including SVHN, CIFAR10, and CIFAR100, demonstrating that our objective function allows to jointly train a backbone network in a discriminative and generative fashion, consequently outperforming existing self-supervised learning strategies in terms of clustering, generation and out-of-distribution detection performance by a wide margin. We also demonstrate that the solution can be integrated into a neuro-symbolic framework to tackle a simple yet non-trivial instantiation of the symbol grounding problem. The code is publicly available at https://github.com/emsansone/GEDI.

Automating formal proofs of combinatorial identities is challenging for LLM-based provers, as long-horizon proof planning is required and unconstrained search quickly explodes. Symbolic methods such as the Wilf-Zeilberger (WZ) method can achieve a mechanized proof of combinatorial identities by constructing special auxiliary functions and demonstrating that they satisfy specific recurrence relations. We propose WZ-LLM, a neuro-symbolic framework that turns WZ proof plans into executable proof sketches in Lean 4 and uses an LLM-based prover to discharge the resulting machine-checkable subgoals. We also train a dedicated WZ-Prover via a Lean-kernel-verified bootstrapping loop with expert-verified iteration, followed by DAPO-based refinement. Experiments show that WZ-LLM achieves a 34% proof success rate on LCI-Test (100 classic combinatorial identities), outperforming strong baselines such as DeepSeek-V3 and Goedel-Prover-V2, and delivering consistent gains on CombiBench and PutnamBench-Comb. These results indicate that our framework provides two complementary strengths: improved direct proving for identities beyond the scope of WZ, and substantially higher end-to-end success when WZ sketches guide a specialized prover.

Neuro-symbolic systems aim to combine the expressive structure of symbolic logic with the flexibility of neural learning; yet, generative models typically lack mechanisms to enforce declarative constraints at generation time. We propose Logic-Guided Vector Fields (LGVF), a neuro-symbolic framework that injects symbolic knowledge, specified as differentiable relaxations of logical constraints, into flow matching generative models. LGVF couples two complementary mechanisms: (1) a training-time logic loss that penalizes constraint violations along continuous flow trajectories, with weights that emphasize correctness near the target distribution; and (2) an inference-time adjustment that steers sampling using constraint gradients, acting as a lightweight, logic-informed correction to the learned dynamics. We evaluate LGVF on three constrained generation case studies spanning linear, nonlinear, and multi-region feasibility constraints. Across all settings, LGVF reduces constraint violations by 59-82% compared to standard flow matching and achieves the lowest violation rates in each case. In the linear and ring settings, LGVF also improves distributional fidelity as measured by MMD, while in the multi-obstacle setting, we observe a satisfaction-fidelity trade-off, with improved feasibility but increased MMD. Beyond quantitative gains, LGVF yields constraint-aware vector fields exhibiting emergent obstacle-avoidance behavior, routing samples around forbidden regions without explicit path planning.

Theory-of-Mind (ToM), the ability to infer others' perceptions and mental states, is fundamental to human interaction but remains a challenging task for Large Language Models (LLMs). While existing ToM reasoning methods show promise with reasoning via perceptual perspective-taking, they often rely excessively on LLMs, reducing their efficiency and limiting their applicability to high-order ToM reasoning, which requires multi-hop reasoning about characters' beliefs. To address these issues, we present EnigmaToM, a novel neuro-symbolic framework that enhances ToM reasoning by integrating a Neural Knowledge Base of entity states (Enigma) for (1) a psychology-inspired iterative masking mechanism that facilitates accurate perspective-taking and (2) knowledge injection that elicits key entity information. Enigma generates structured representations of entity states, which construct spatial scene graphs -- leveraging spatial information as an inductive bias -- for belief tracking of various ToM orders and enhancing events with fine-grained entity state details. Experimental results on multiple benchmarks, including ToMi, HiToM, and FANToM, show that EnigmaToM significantly improves ToM reasoning across LLMs of varying sizes, particularly excelling in high-order reasoning scenarios.

Mathematical reasoning has long been a key benchmark for evaluating large language models. Although substantial progress has been made on math word problems, the need for reasoning over tabular data in real-world applications has been overlooked. For instance, applications such as business intelligence demand not only multi-step numerical reasoning with tables but also robustness to incomplete or inconsistent information. However, comprehensive evaluation in this area is severely limited, constrained by the reliance on manually collected tables that are difficult to scale and the lack of coverage for potential traps encountered in real-world scenarios. To address this problem, we propose AutoT2T, a neuro-symbolic framework that controllably transforms math word problems into scalable and verified tabular reasoning tasks. Building on this pipeline, we develop TabularMath, a benchmark comprising four subsets that include both text-based and image-based tables, covering table complexity, table quality, and table representation dimensions. Our study reveals three key observations: (1) Table complexity and reasoning difficulty impact reasoning performance jointly; (2) Low-quality tables pose severe risks to reliable reasoning in current LLMs; (3) Different table modalities show similar trends, with text-based tables typically being easier for models to reason over. In-depth analyses are conducted for each observation to guide future research.

Logical reasoning encompasses deduction, induction, and abduction. However, while Large Language Models (LLMs) have effectively mastered the former two, abductive reasoning remains significantly underexplored. Existing frameworks, predominantly designed for static deductive tasks, fail to generalize to abductive reasoning due to unstructured state representation and lack of explicit state control. Consequently, they are inevitably prone to Evidence Fabrication, Context Drift, Failed Backtracking, and Early Stopping. To bridge this gap, we introduce Graph of States (GoS), a general-purpose neuro-symbolic framework tailored for abductive tasks. GoS grounds multi-agent collaboration in a structured belief states, utilizing a causal graph to explicitly encode logical dependencies and a state machine to govern the valid transitions of the reasoning process. By dynamically aligning the reasoning focus with these symbolic constraints, our approach transforms aimless, unconstrained exploration into a convergent, directed search. Extensive evaluations on two real-world datasets demonstrate that GoS significantly outperforms all baselines, providing a robust solution for complex abductive tasks. Code repo and all prompts: https://anonymous.4open.science/r/Graph-of-States-5B4E.

Time series classification is a task of paramount importance, as this kind of data often arises in safety-critical applications. However, it is typically tackled with black-box deep learning methods, making it hard for humans to understand the rationale behind their output. To take on this challenge, we propose a novel approach, STELLE (Signal Temporal logic Embedding for Logically-grounded Learning and Explanation), a neuro-symbolic framework that unifies classification and explanation through direct embedding of trajectories into a space of temporal logic concepts. By introducing a novel STL-inspired kernel that maps raw time series to their alignment with predefined STL formulae, our model jointly optimises accuracy and interpretability, as each prediction is accompanied by the most relevant logical concepts that characterise it. This yields (i) local explanations as human-readable STL conditions justifying individual predictions, and (ii) global explanations as class-characterising formulae. Experiments demonstrate that STELLE achieves competitive accuracy while providing logically faithful explanations, validated on diverse real-world benchmarks.

Chain-of-Thought (CoT) reasoning has been shown to improve the performance of large language models (LLMs), yet existing optimization methods largely rely on outcome-based feedback, leaving the logical validity of intermediate reasoning steps largely unverified. To address the gap whereby LLMs arrive at correct final answers through logically flawed intermediate reasoning chains, we propose LogicTrack, a neuro-symbolic framework that audits reasoning trajectories by auto-formalizing each reasoning step into symbolic representations and verifying it with automated theorem provers. LogicTrack introduces Solver-Based Backtracking Reward (SBR), a step-wise scoring mechanism that quantifies logical soundness and guides backtracking tree search at inference time. We further extend LogicTrack to construct supervised fine-tuning (SFT) data with backtracking traces from its trajectories, enabling fine-tuned models to internalize step-wise auditing as an intrinsic capability. Extensive experiments across 8 reasoning benchmarks and 7 LLMs demonstrate that LogicTrack effectively improves both the verifiability of reasoning chains and final answer pass rate, thereby enhancing overall CoT quality and trustworthiness in high-stakes domains.

Neurosymbolic (NeSy) predictors combine neural perception with symbolic reasoning to solve tasks like visual reasoning. However, standard NeSy predictors assume conditional independence between the symbols they extract, thus limiting their ability to model interactions and uncertainty - often leading to overconfident predictions and poor out-of-distribution generalisation. To overcome the limitations of the independence assumption, we introduce neurosymbolic diffusion models (NeSyDMs), a new class of NeSy predictors that use discrete diffusion to model dependencies between symbols. Our approach reuses the independence assumption from NeSy predictors at each step of the diffusion process, enabling scalable learning while capturing symbol dependencies and uncertainty quantification. Across both synthetic and real-world benchmarks - including high-dimensional visual path planning and rule-based autonomous driving - NeSyDMs achieve state-of-the-art accuracy among NeSy predictors and demonstrate strong calibration.

We study the interpretability issue of task-oriented dialogue systems in this paper. Previously, most neural-based task-oriented dialogue systems employ an implicit reasoning strategy that makes the model predictions uninterpretable to humans. To obtain a transparent reasoning process, we introduce neuro-symbolic to perform explicit reasoning that justifies model decisions by reasoning chains. Since deriving reasoning chains requires multi-hop reasoning for task-oriented dialogues, existing neuro-symbolic approaches would induce error propagation due to the one-phase design. To overcome this, we propose a two-phase approach that consists of a hypothesis generator and a reasoner. We first obtain multiple hypotheses, i.e., potential operations to perform the desired task, through the hypothesis generator. Each hypothesis is then verified by the reasoner, and the valid one is selected to conduct the final prediction. The whole system is trained by exploiting raw textual dialogues without using any reasoning chain annotations. Experimental studies on two public benchmark datasets demonstrate that the proposed approach not only achieves better results, but also introduces an interpretable decision process.

Large language models (LLMs) continue to face challenges in reliably solving reasoning tasks, particularly those that require precise rule following, as often found in mathematical reasoning. This paper introduces a novel neurosymbolic method that improves LLM reasoning by encoding hidden states into neurosymbolic vectors, enabling problem-solving within a neurosymbolic vector space. The results are decoded and merged with the original hidden state, significantly boosting the model's performance on numerical reasoning tasks. By offloading computation through neurosymbolic representations, this method enhances efficiency, reliability, and interpretability. Experimental results demonstrate an average of 88.6% lower cross-entropy loss and 15.4 times more problems correctly solved on a suite of mathematical reasoning tasks compared to chain-of-thought prompting and supervised fine-tuning (LoRA), without degrading performance on other tasks. We make our code available at: https://github.com/vdhanraj/Neurosymbolic-LLM.

Large language models (LLMs) exhibit strong general-purpose reasoning capabilities, yet they frequently hallucinate when used as world models (WMs), where strict compliance with deterministic transition rules--particularly in corner cases--is essential. In contrast, Symbolic WMs provide logical consistency but lack semantic expressivity. To bridge this gap, we propose Neuro-Symbolic Synergy (NeSyS), a framework that integrates the probabilistic semantic priors of LLMs with executable symbolic rules to achieve both expressivity and robustness. NeSyS alternates training between the two models using trajectories inadequately explained by the other. Unlike rule-based prompting, the symbolic WM directly constrains the LLM by modifying its output probability distribution. The neural WM is fine-tuned only on trajectories not covered by symbolic rules, reducing training data by 50% without loss of accuracy. Extensive experiments on three distinct interactive environments, i.e., ScienceWorld, Webshop, and Plancraft, demonstrate NeSyS's consistent advantages over baselines in both WM prediction accuracy and data efficiency.

Humans interact with the environment using a combination of perception - transforming sensory inputs from their environment into symbols, and cognition - mapping symbols to knowledge about the environment for supporting abstraction, reasoning by analogy, and long-term planning. Human perception-inspired machine perception, in the context of AI, refers to large-scale pattern recognition from raw data using neural networks trained using self-supervised learning objectives such as next-word prediction or object recognition. On the other hand, machine cognition encompasses more complex computations, such as using knowledge of the environment to guide reasoning, analogy, and long-term planning. Humans can also control and explain their cognitive functions. This seems to require the retention of symbolic mappings from perception outputs to knowledge about their environment. For example, humans can follow and explain the guidelines and safety constraints driving their decision-making in safety-critical applications such as healthcare, criminal justice, and autonomous driving. This article introduces the rapidly emerging paradigm of Neurosymbolic AI combines neural networks and knowledge-guided symbolic approaches to create more capable and flexible AI systems. These systems have immense potential to advance both algorithm-level (e.g., abstraction, analogy, reasoning) and application-level (e.g., explainable and safety-constrained decision-making) capabilities of AI systems.

Nowadays, neural networks act as a synonym for artificial intelligence. Present neural network models, although remarkably powerful, are inefficient both in terms of data and energy. Several alternative forms of neural networks have been proposed to address some of these problems. Specifically, spiking neural networks are suitable for efficient hardware implementations. However, effective learning algorithms for spiking networks remain elusive, although it is suspected that effective plasticity mechanisms could alleviate the problem of data efficiency. Here, we present a new framework for spiking neural networks - Spark - built upon the idea of modular design, from simple components to entire models. The aim of this framework is to provide an efficient and streamlined pipeline for spiking neural networks. We showcase this framework by solving the sparse-reward cartpole problem with simple plasticity mechanisms. We hope that a framework compatible with traditional ML pipelines may accelerate research in the area, specifically for continuous and unbatched learning, akin to the one animals exhibit.

We investigate a relatively under-explored class of hybrid neurosymbolic models that integrate symbolic learning with neural reasoning to construct data generators meeting formal correctness criteria. In Symbolic Neural Generators (SNGs), symbolic learners examine logical specifications of feasible data from a small set of instances -- sometimes just one. Each specification in turn constrains the conditional information supplied to a neural-based generator, which rejects any instance violating the symbolic specification. Like other neurosymbolic approaches, SNG exploits the complementary strengths of symbolic and neural methods. The outcome of an SNG is a pair (H, X), where H is a symbolic description of feasible instances constructed from data, and X a set of generated new instances that satisfy the description. We introduce a semantics for such systems, based on the construction of appropriate base and fibre partially-ordered sets combined into an overall partial order. We implement an SNG combining a restricted form of Inductive Logic Programming (ILP) with a large language model (LLM) and evaluate it on early-stage drug design. Our main interest is the description and the set of potential inhibitor molecules generated by the SNG. On benchmark problems -- where drug targets are well understood -- SNG performance is statistically comparable to state-of-the-art methods. On exploratory problems with poorly understood targets, generated molecules exhibit binding affinities on par with leading clinical candidates. Experts further find the symbolic specifications useful as preliminary filters, with several generated molecules identified as viable for synthesis and wet-lab testing.

The field of artificial intelligence has seen explosive growth and exponential success. The last phase of development showcased deep learnings ability to solve a variety of difficult problems across a multitude of domains. Many of these networks met and exceeded human benchmarks by becoming experts in the domains in which they are trained. Though the successes of artificial intelligence have begun to overshadow its failures, there is still much that separates current artificial intelligence tools from becoming the exceptional general learners that humans are. In this paper, we identify the ten commandments upon which human intelligence is systematically and hierarchically built. We believe these commandments work collectively to serve as the essential ingredients that lead to the emergence of higher-order cognition and intelligence. This paper discusses a computational framework that could house these ten commandments and suggests new architectural modifications that could lead to the development of smarter, more explainable, and generalizable artificial systems inspired by a neuromorphic approach.

This work introduces a new computational theory of mind grounded in set theory and hyperdimensional computing. Whereas traditional neural networks rely on continuous weights and matrix multiplication, this framework works with sparse binary data. It represents information as discrete sets, directly modeling biological neural population codes. I demonstrate that associative memory emerges naturally from network topologies featuring a combinatorially expanded hidden layer. Learning is driven by topological plasticity rather than scalar weight adjustments. This architecture unifies auto-associative and hetero-associative learning under a single core algorithm: information retrieval via subset pattern matching and exact nearest-neighbor search. Operating with constant-time complexity, these mechanisms bridge perceptual data (sparse distributed representations) and symbols (sparse holographic representations) without continuous bottlenecks. Mapping this framework to neuroanatomy, I propose that both the cerebellum and the neocortex implement variants of this algorithm, making subset pattern matching the fundamental engine of cognition. Because it relies on discrete logic rather than matrix arithmetic, this algorithm translates directly into in-memory hardware. This opens a new route toward synthetic intelligence with human-level energy efficiency.

Multimodal functional neuroimaging enables systematic analysis of brain mechanisms and provides discriminative representations for brain-computer interface (BCI) decoding. However, its acquisition is constrained by high costs and feasibility limitations. Moreover, underrepresentation of specific groups undermines fairness of BCI decoding model. To address these challenges, we propose a unified representation framework for multimodal functional neuroimaging via generative artificial intelligence (AI). By mapping multimodal functional neuroimaging into a unified representation space, the proposed framework is capable of generating data for acquisition-constrained modalities and underrepresented groups. Experiments show that the framework can generate data consistent with real brain activity patterns, provide insights into brain mechanisms, and improve performance on downstream tasks. More importantly, it can enhance model fairness by augmenting data for underrepresented groups. Overall, the framework offers a new paradigm for decreasing the cost of acquiring multimodal functional neuroimages and enhancing the fairness of BCI decoding models.

Neurosymbolic approaches integrating large language models with formal reasoning have recently achieved human-level performance on mathematics competition problems in algebra, geometry and number theory. In comparison, combinatorics remains a challenging domain, characterized by a lack of appropriate benchmarks and theorem libraries. To address this gap, we introduce CombiBench, a comprehensive benchmark comprising 100 combinatorial problems, each formalized in Lean~4 and paired with its corresponding informal statement. The problem set covers a wide spectrum of difficulty levels, ranging from middle school to IMO and university level, and span over ten combinatorial topics. CombiBench is suitable for testing IMO solving capabilities since it includes all IMO combinatorial problems since 2000 (except IMO 2004 P3 as its statement contain an images). Furthermore, we provide a comprehensive and standardized evaluation framework, dubbed Fine-Eval (for Fill-in-the-blank in Lean Evaluation), for formal mathematics. It accommodates not only proof-based problems but also, for the first time, the evaluation of fill-in-the-blank questions. Using Fine-Eval as the evaluation method and Kimina Lean Server as the backend, we benchmark several LLMs on CombiBench and observe that their capabilities for formally solving combinatorial problems remain limited. Among all models tested (none of which has been trained for this particular task), Kimina-Prover attains the best results, solving 7 problems (out of 100) under both ``with solution'' and ``without solution'' scenarios. We open source the benchmark dataset alongside with the code of the proposed evaluation method at https://github.com/MoonshotAI/CombiBench/.

Toward combining inductive reasoning with perception abilities, we develop techniques for neurosymbolic program synthesis where perceptual input is first parsed by neural nets into a low-dimensional interpretable representation, which is then processed by a synthesized program. We explore several techniques for relaxing the problem and jointly learning all modules end-to-end with gradient descent: multitask learning; amortized inference; overparameterization; and a differentiable strategy for penalizing lengthy programs. Collectedly this toolbox improves the stability of gradient-guided program search, and suggests ways of learning both how to perceive input as discrete abstractions, and how to symbolically process those abstractions as programs.

The growing popularity of neuro symbolic reasoning has led to the adoption of various forms of differentiable (i.e., fuzzy) first order logic. We introduce PyReason, a software framework based on generalized annotated logic that both captures the current cohort of differentiable logics and temporal extensions to support inference over finite periods of time with capabilities for open world reasoning. Further, PyReason is implemented to directly support reasoning over graphical structures (e.g., knowledge graphs, social networks, biological networks, etc.), produces fully explainable traces of inference, and includes various practical features such as type checking and a memory-efficient implementation. This paper reviews various extensions of generalized annotated logic integrated into our implementation, our modern, efficient Python-based implementation that conducts exact yet scalable deductive inference, and a suite of experiments. PyReason is available at: github.com/lab-v2/pyreason.

LLM-based agents have demonstrated strong capabilities in data-intensive analytical tasks, yet their outputs are rarely verifiable: a reliance on linear text trajectories makes their reasoning difficult to audit. In particular, deterministic computations over raw data and semantic deductions over natural-language claims are often entangled in an unstructured stream, leaving numerical conclusions hard to reproduce and qualitative judgments hard to inspect. To address this, we propose VeriGraph, a traceable neuro-symbolic reasoning framework that enables agents to construct an explicit heterogeneous evidence directed acyclic graph (DAG) during execution. VeriGraph introduces three evidence-expansion primitives, namely computational, grounding, and derivational expansion, to connect raw data, interpreter variables, computed results, and natural-language claims in a unified graph. Under this formulation, structural traceability is reduced to graph reachability from raw data sources to terminal claims, while semantic support is measured by claim-level evidence evaluation. To improve graph construction, we further design a graph-based policy optimization strategy with a composite reward that jointly supervises answer correctness, computational integrity, and derivational coherence. Experiments on four benchmarks show that VeriGraph-8B achieves the highest overall score among all baselines. More importantly, VeriGraph produces auditable evidence graphs with substantially stronger claim grounding, achieving a 87.61\% Grounding Rate under our claim-level evidence support evaluation. These results suggest that explicit evidence-graph construction is a promising path toward verifiable data-analytic agents. Our code is available at https://github.com/ignorejjj/VeriGraph.

Understanding how complex cognitive functions are organized within artificial systems is central to interpreting large language models (LLMs) and relating them to biological cognition. Yet although LLMs exhibit broad cognitive-like behaviours, it remains unclear whether their internal representations form reproducible functional systems that explain behaviour, failure and links to human cognition. Here we present NeuroCogMap, a cognitive neuroscience-inspired framework that organizes internal features of LLMs into functional parcels and links them to interpretable functions, cognitive capabilities and a cognitive hierarchy. These parcels form a stable and semantically coherent organization that is partly conserved across models and functionally linked to model outputs. Within this organization, major LLM failures, including hallucination, bias, refusal failure and sycophancy, correspond to distinct disruptions in representational and behavioural-control systems, yielding internal signatures for mechanism-guided detection and targeted intervention. Beyond model behaviour, NeuroCogMap improves prediction of human cortical responses during naturalistic language comprehension, with the strongest correspondence in higher-order association cortex. At the cognitive level, its internal signatures expose latent strategies that guide refinements of classical models of human decision-making. Together, these findings establish NeuroCogMap as a system-level framework for mapping functional organization in artificial systems and for relating this organization to human cortical function and cognitive behaviour.

Neuro-symbolic learning was proposed to address challenges with training neural networks for complex reasoning tasks with the added benefits of interpretability, reliability, and efficiency. Neuro-symbolic learning methods traditionally train neural models in conjunction with symbolic programs, but they face significant challenges that limit them to simplistic problems. On the other hand, purely-neural foundation models now reach state-of-the-art performance through prompting rather than training, but they are often unreliable and lack interpretability. Supplementing foundation models with symbolic programs, which we call neuro-symbolic prompting, provides a way to use these models for complex reasoning tasks. Doing so raises the question: What role does specialized model training as part of neuro-symbolic learning have in the age of foundation models? To explore this question, we highlight three pitfalls of traditional neuro-symbolic learning with respect to the compute, data, and programs leading to generalization problems. This position paper argues that foundation models enable generalizable neuro-symbolic solutions, offering a path towards achieving the original goals of neuro-symbolic learning without the downsides of training from scratch.

Current advances in Artificial Intelligence (AI) and Machine Learning (ML) have achieved unprecedented impact across research communities and industry. Nevertheless, concerns about trust, safety, interpretability and accountability of AI were raised by influential thinkers. Many have identified the need for well-founded knowledge representation and reasoning to be integrated with deep learning and for sound explainability. Neural-symbolic computing has been an active area of research for many years seeking to bring together robust learning in neural networks with reasoning and explainability via symbolic representations for network models. In this paper, we relate recent and early research results in neurosymbolic AI with the objective of identifying the key ingredients of the next wave of AI systems. We focus on research that integrates in a principled way neural network-based learning with symbolic knowledge representation and logical reasoning. The insights provided by 20 years of neural-symbolic computing are shown to shed new light onto the increasingly prominent role of trust, safety, interpretability and accountability of AI. We also identify promising directions and challenges for the next decade of AI research from the perspective of neural-symbolic systems.

Softmax attention is the principle backbone of foundation models for various artificial intelligence applications, yet its quadratic complexity in sequence length can limit its inference throughput in long-context settings. To address this challenge, alternative architectures such as linear attention, State Space Models (SSMs), and Recurrent Neural Networks (RNNs) have been considered as more efficient alternatives. While connections between these approaches exist, such models are commonly developed in isolation and there is a lack of theoretical understanding of the shared principles underpinning these architectures and their subtle differences, greatly influencing performance and scalability. In this paper, we introduce the Dynamical Systems Framework (DSF), which allows a principled investigation of all these architectures in a common representation. Our framework facilitates rigorous comparisons, providing new insights on the distinctive characteristics of each model class. For instance, we compare linear attention and selective SSMs, detailing their differences and conditions under which both are equivalent. We also provide principled comparisons between softmax attention and other model classes, discussing the theoretical conditions under which softmax attention can be approximated. Additionally, we substantiate these new insights with empirical validations and mathematical arguments. This shows the DSF's potential to guide the systematic development of future more efficient and scalable foundation models.

Brain decoding, a pivotal field in neuroscience, aims to reconstruct stimuli from acquired brain signals, primarily utilizing functional magnetic resonance imaging (fMRI). Currently, brain decoding is confined to a per-subject-per-model paradigm, limiting its applicability to the same individual for whom the decoding model is trained. This constraint stems from three key challenges: 1) the inherent variability in input dimensions across subjects due to differences in brain size; 2) the unique intrinsic neural patterns, influencing how different individuals perceive and process sensory information; 3) limited data availability for new subjects in real-world scenarios hampers the performance of decoding models. In this paper, we present a novel approach, MindBridge, that achieves cross-subject brain decoding by employing only one model. Our proposed framework establishes a generic paradigm capable of addressing these challenges by introducing biological-inspired aggregation function and novel cyclic fMRI reconstruction mechanism for subject-invariant representation learning. Notably, by cycle reconstruction of fMRI, MindBridge can enable novel fMRI synthesis, which also can serve as pseudo data augmentation. Within the framework, we also devise a novel reset-tuning method for adapting a pretrained model to a new subject. Experimental results demonstrate MindBridge's ability to reconstruct images for multiple subjects, which is competitive with dedicated subject-specific models. Furthermore, with limited data for a new subject, we achieve a high level of decoding accuracy, surpassing that of subject-specific models. This advancement in cross-subject brain decoding suggests promising directions for wider applications in neuroscience and indicates potential for more efficient utilization of limited fMRI data in real-world scenarios. Project page: https://littlepure2333.github.io/MindBridge

This work presents the Parallelized Hierarchical Connectome (PHC), a general architectural framework that upgrades temporal-only State-Space Models (SSMs) into spatiotemporal recurrent networks. Conventional SSMs achieve parallel-scan training but are limited to temporal recurrence, lacking lateral or feedback interactions within a single timestep. PHC maps the diagonal SSM core to a shared Neuron Layer and inter-neuronal communication to a shared Synapse Layer of hierarchical regions, reconnected by a Multi-Transmission Loop iterating spatial recurrence within each temporal window, at parameter complexity Theta(D^2) versus Theta(D^2 L) of stacked SSMs. This spatiotemporal framework enables the seamless integration of neuro-physical priors typically intractable for standard SSMs, including adaptive LIF, synaptic delay, STP, Dale's Law with E/I-asymmetric topology, and STDP. The framework is instantiated as PHCSSM, the first spiking SSM that integrates all five biological priors and is evaluated on long-sequence data, achieving test accuracy competitive with state-of-the-art SSM baselines at 1,312 to 4,891 trainable parameters (1 to 4 orders of magnitude smaller than every baseline). PHCSSM further admits a sequential recurrent spiking neural network (RSNN) deployment mode that converges asymptotically to the parallel-scan training mode without artificial-neural-network-to-spiking-neural-network (ANN-to-SNN) conversion, with cross-backend reproducibility verified across four hardware backends (x86 CPU, H100 GPU, Cortex-A76, Cortex-M4F) including end-to-end deployment on the Cortex-M4F microcontroller (40 KB SRAM, 128 KB Flash). PHCSSM thereby bridges parallel-scan SSM and biologically grounded RSNN, two paradigms with previously incompatible training regimes, into a single architecture and trained weights.

State-of-the-art neurosymbolic learning systems use probabilistic reasoning to guide neural networks towards predictions that conform to logical constraints over symbols. Many such systems assume that the probabilities of the considered symbols are conditionally independent given the input to simplify learning and reasoning. We study and criticise this assumption, highlighting how it can hinder optimisation and prevent uncertainty quantification. We prove that loss functions bias conditionally independent neural networks to become overconfident in their predictions. As a result, they are unable to represent uncertainty over multiple valid options. Furthermore, we prove that these loss functions are difficult to optimise: they are non-convex, and their minima are usually highly disconnected. Our theoretical analysis gives the foundation for replacing the conditional independence assumption and designing more expressive neurosymbolic probabilistic models.

Understanding the inner workings of neural networks is essential for enhancing model performance and interpretability. Current research predominantly focuses on examining the connection between individual neurons and the model's final predictions. Which suffers from challenges in interpreting the internal workings of the model, particularly when neurons encode multiple unrelated features. In this paper, we propose a novel framework that transitions the focus from analyzing individual neurons to investigating groups of neurons, shifting the emphasis from neuron-output relationships to functional interaction between neurons. Our automated framework, NeurFlow, first identifies core neurons and clusters them into groups based on shared functional relationships, enabling a more coherent and interpretable view of the network's internal processes. This approach facilitates the construction of a hierarchical circuit representing neuron interactions across layers, thus improving interpretability while reducing computational costs. Our extensive empirical studies validate the fidelity of our proposed NeurFlow. Additionally, we showcase its utility in practical applications such as image debugging and automatic concept labeling, thereby highlighting its potential to advance the field of neural network explainability.

The rapid evolution of artificial intelligence (AI) has shifted from static, data-driven models to dynamic systems capable of perceiving and interacting with real-world environments. Despite advancements in pattern recognition and symbolic reasoning, current AI systems, such as large language models, remain disembodied, unable to physically engage with the world. This limitation has driven the rise of embodied AI, where autonomous agents, such as humanoid robots, must navigate and manipulate unstructured environments with human-like adaptability. At the core of this challenge lies the concept of Neural Brain, a central intelligence system designed to drive embodied agents with human-like adaptability. A Neural Brain must seamlessly integrate multimodal sensing and perception with cognitive capabilities. Achieving this also requires an adaptive memory system and energy-efficient hardware-software co-design, enabling real-time action in dynamic environments. This paper introduces a unified framework for the Neural Brain of embodied agents, addressing two fundamental challenges: (1) defining the core components of Neural Brain and (2) bridging the gap between static AI models and the dynamic adaptability required for real-world deployment. To this end, we propose a biologically inspired architecture that integrates multimodal active sensing, perception-cognition-action function, neuroplasticity-based memory storage and updating, and neuromorphic hardware/software optimization. Furthermore, we also review the latest research on embodied agents across these four aspects and analyze the gap between current AI systems and human intelligence. By synthesizing insights from neuroscience, we outline a roadmap towards the development of generalizable, autonomous agents capable of human-level intelligence in real-world scenarios.

Cognitive neuroscience is enjoying rapid increase in extensive public brain-imaging datasets. It opens the door to large-scale statistical models. Finding a unified perspective for all available data calls for scalable and automated solutions to an old challenge: how to aggregate heterogeneous information on brain function into a universal cognitive system that relates mental operations/cognitive processes/psychological tasks to brain networks? We cast this challenge in a machine-learning approach to predict conditions from statistical brain maps across different studies. For this, we leverage multi-task learning and multi-scale dimension reduction to learn low-dimensional representations of brain images that carry cognitive information and can be robustly associated with psychological stimuli. Our multi-dataset classification model achieves the best prediction performance on several large reference datasets, compared to models without cognitive-aware low-dimension representations, it brings a substantial performance boost to the analysis of small datasets, and can be introspected to identify universal template cognitive concepts.

The informational synthesis of neural structures, processes, parameters and characteristics that allow a unified description and modeling as neural machines of natural and artificial neural systems is presented. The general informational parameters as the global quantitative measure of the neural systems computing potential as absolute and relative neural power were proposed. Neural information organizing and processing follows the way in which nature manages neural information by developing functions, functionalities and circuits related to different internal or peripheral components and also to the whole system through a non-deterministic memorization, fragmentation and aggregation of afferent and efferent information, deep neural information processing representing multiple alternations of fragmentation and aggregation stages. The relevant neural characteristics were integrated into a neural machine type model that incorporates unitary also peripheral or interface components as the central ones. The proposed approach allows overcoming the technical constraints in artificial computational implementations of neural information processes and also provides a more relevant description of natural ones.

Prior studies on the emergence in large models have primarily focused on how the functional capabilities of large language models (LLMs) scale with model size. Our research, however, transcends this traditional paradigm, aiming to deepen our understanding of the emergence within LLMs by placing a special emphasis not just on the model size but more significantly on the complex behavior of neuron interactions during the training process. By introducing the concepts of "self-organization" and "multifractal analysis," we explore how neuron interactions dynamically evolve during training, leading to "emergence," mirroring the phenomenon in natural systems where simple micro-level interactions give rise to complex macro-level behaviors. To quantitatively analyze the continuously evolving interactions among neurons in large models during training, we propose the Neuron-based Multifractal Analysis (NeuroMFA). Utilizing NeuroMFA, we conduct a comprehensive examination of the emergent behavior in LLMs through the lens of both model size and training process, paving new avenues for research into the emergence in large models.

Practically everything computers do is better, faster, and more power-efficient than the brain. For example, a calculator crunches numbers more energy-efficiently than any human. Yet AI models are a thousand times less efficient than the brain. These models use artificial neural networks (ANNs) and require GPUs for the multiplication of huge matrices. In contrast, spiking neural networks (SNNs) of the brain have no matrix multiplication and much smaller energy requirements. This manifesto proposes a framework for thinking about popular AI models in terms of spiking networks and polychronization, and for interpreting spiking activity as nature's way of implementing look-up tables. This offers a way to convert AI models into a novel type of architecture with the promise of a thousandfold improvement in efficiency. Code is available at https://github.com/izhikevich/SNN

Policy enforcement for LLM agents has shifted from single-turn content moderation to compound, application-specific policies evaluated over multi-turn transcripts and tool-call trajectories. Fine-tuned guardrail models are efficient but degrade on compound policies, and while LLM-as-a-judge approaches achieve higher accuracy, they incur high inference cost and tend to produce unstable predictions. Neurosymbolic methods offer a natural alternative, decomposing the policy into narrow neural decisions composed under explicit logic. However, existing symbolic layers lack the required expressiveness and are optimized against fixed data rather than the policy itself. To address this, we introduce SCOPE, which compiles a policy into an executable program of neural predicates executed by small models, deterministic extractors, and code that composes their outputs. The program is optimized jointly with its training data, using adversarial generation of counterexamples that target where the program deviates from the policy. We evaluate SCOPE on a benchmark of real-world policy tasks against prompt optimization, task decomposition, and workflow generation methods, achieving the highest average accuracy across tasks and models. Programs optimized with the weakest executor transfer to other models without further optimization. This allows them to be deployed in production on inexpensive models, where they reach accuracy comparable to frontier reasoning models. Unlike these monolithic models, SCOPE produces substantially more stable predictions, and each verdict is interpretable through the predicate outputs that produced it. Additionally, we validate the key components of our method through an ablation study. SCOPE thus enables reliable, interpretable, and efficient policy enforcement at production scale.

Despite rapid progress in multimodal foundation models, embodied intelligence community still lacks a unified, physically grounded foundation model that integrates perception, reasoning, and planning within real-world spatial-temporal dynamics. We introduce RynnBrain, an open-source spatiotemporal foundation model for embodied intelligence. RynnBrain strengthens four core capabilities in a unified framework: comprehensive egocentric understanding, diverse spatiotemporal localization, physically grounded reasoning, and physics-aware planning. The RynnBrain family comprises three foundation model scales (2B, 8B, and 30B-A3B MoE) and four post-trained variants tailored for downstream embodied tasks (i.e., RynnBrain-Nav, RynnBrain-Plan, and RynnBrain-VLA) or complex spatial reasoning tasks (i.e., RynnBrain-CoP). In terms of extensive evaluations on 20 embodied benchmarks and 8 general vision understanding benchmarks, our RynnBrain foundation models largely outperform existing embodied foundation models by a significant margin. The post-trained model suite further substantiates two key potentials of the RynnBrain foundation model: (i) enabling physically grounded reasoning and planning, and (ii) serving as a strong pretrained backbone that can be efficiently adapted to diverse embodied tasks.

We present Sequential Planning via Anchored Robotic Keypoints, SPARK, a training-free neurosymbolic manipulation system that reaches 43.7% on six LIBERO-PRO position \& task cells, more than doubling CaP-Agent0 and Vision-Language-Action (VLA) baselines. CaP-Agent0, a multi-turn code-generation agent, achieves 18.2% by re-querying an LLM at every turn, but its restart-from-scratch solution proves costly against minor policy failures. Perception is the layer that fails most under position and task changes so SPARK spends its computation there. A single Gemini call composes the plan as a typed behavior tree (BT) of composable primitives, each already containing the low-level control (motion, grasping, depth geometry) a code-generation agent would otherwise regenerate on every trial. The rest of the budget goes to perception: a second Gemini call proposes three alternative text prompts per object, SAM3 evaluates each, and we keep the prompttolabel pair with the most confident detection and a recovery loop then retries a failed primitive against freshly detected objects, with no new LLM call. The alternative prompts add +27.7 points on the spatial suite and +10.0 on the object suite, with the recovery loop adding +5.0 overall. SPARK runs the same primitives on three robot families (UR10e, Franka FR3, bimanual Franka) across nine unique tasks at twenty trials each, averaging 68%. Since the detector, planner, and controller modules sit behind the typed plan, they swap independently without training, and each primitive's checkable post-condition traces a failure to the corresponding module or a kinematic limit. Every trial logs a verified, labeled trajectory, so a training-free planner that already beats VLAs can supply the data those policies need without teleoperation. Project page: https://cwru-aism.github.io/spark-page/

Spiking Neural Networks (SNNs) provide a promising framework for energy-efficient and biologically grounded computation; however, scalable learning in deep recurrent architectures with sparse connectivity remains a major challenge. In this work, we propose a structured multi-layer recurrent SNN architecture composed of locally dense recurrent layers augmented with sparse small-world long-range projections to a readout population. The long-range connectivity is largely fixed, preserving routing efficiency and hardware scalability, while synaptic adaptation is performed using strictly local plasticity mechanisms. To enable supervised learning without backpropagation or surrogate gradients, we introduce a biologically motivated learning framework that combines: (i) population-based winner-take-all (WTA) teaching signals at the output layer, (ii) fixed random broadcast alignment feedback pathways, and (iii) low-dimensional modulatory neuron populations that gate synaptic updates through three-factor learning rules with eligibility traces. This design supports deep recurrent computation with sparse global communication and purely local synaptic updates. We analyze the algorithmic properties, computational complexity, and hardware feasibility of the proposed approach, and demonstrate stable learning and competitive performance on benchmark classification tasks. The results highlight the potential of structured recurrence and neuromodulatory learning to enable scalable, hardware-compatible SNN training beyond gradient-based methods.

Advancements in LLMs have recently unveiled challenges tied to computational efficiency and continual scalability due to their requirements of huge parameters, making the applications and evolution of these models on devices with limited computation resources and scenarios requiring various abilities increasingly cumbersome. Inspired by modularity within the human brain, there is a growing tendency to decompose LLMs into numerous functional modules, allowing for inference with part of modules and dynamic assembly of modules to tackle complex tasks, such as mixture-of-experts. To highlight the inherent efficiency and composability of the modular approach, we coin the term brick to represent each functional module, designating the modularized structure as configurable foundation models. In this paper, we offer a comprehensive overview and investigation of the construction, utilization, and limitation of configurable foundation models. We first formalize modules into emergent bricks - functional neuron partitions that emerge during the pre-training phase, and customized bricks - bricks constructed via additional post-training to improve the capabilities and knowledge of LLMs. Based on diverse functional bricks, we further present four brick-oriented operations: retrieval and routing, merging, updating, and growing. These operations allow for dynamic configuration of LLMs based on instructions to handle complex tasks. To verify our perspective, we conduct an empirical analysis on widely-used LLMs. We find that the FFN layers follow modular patterns with functional specialization of neurons and functional neuron partitions. Finally, we highlight several open issues and directions for future research. Overall, this paper aims to offer a fresh modular perspective on existing LLM research and inspire the future creation of more efficient and scalable foundational models.

Automated interpretability research aims to identify concepts encoded in neural network features to enhance human understanding of model behavior. Current feature description methods face two critical challenges: limited robustness and the flawed assumption that each neuron encodes only a single concept (monosemanticity), despite growing evidence that neurons are often polysemantic. This assumption restricts the expressiveness of feature descriptions and limits their ability to capture the full range of behaviors encoded in model internals. To address this, we introduce Polysemantic FeatuRe Identification and Scoring Method (PRISM), a novel framework that captures the inherent complexity of neural network features. Unlike prior approaches that assign a single description per feature, PRISM provides more nuanced descriptions for both polysemantic and monosemantic features. We apply PRISM to language models and, through extensive benchmarking against existing methods, demonstrate that our approach produces more accurate and faithful feature descriptions, improving both overall description quality (via a description score) and the ability to capture distinct concepts when polysemanticity is present (via a polysemanticity score).

Human's perception of the visual world is shaped by the stereo processing of 3D information. Understanding how the brain perceives and processes 3D visual stimuli in the real world has been a longstanding endeavor in neuroscience. Towards this goal, we introduce a new neuroscience task: decoding 3D visual perception from EEG signals, a neuroimaging technique that enables real-time monitoring of neural dynamics enriched with complex visual cues. To provide the essential benchmark, we first present EEG-3D, a pioneering dataset featuring multimodal analysis data and extensive EEG recordings from 12 subjects viewing 72 categories of 3D objects rendered in both videos and images. Furthermore, we propose Neuro-3D, a 3D visual decoding framework based on EEG signals. This framework adaptively integrates EEG features derived from static and dynamic stimuli to learn complementary and robust neural representations, which are subsequently utilized to recover both the shape and color of 3D objects through the proposed diffusion-based colored point cloud decoder. To the best of our knowledge, we are the first to explore EEG-based 3D visual decoding. Experiments indicate that Neuro-3D not only reconstructs colored 3D objects with high fidelity, but also learns effective neural representations that enable insightful brain region analysis. The dataset and associated code will be made publicly available.

Brain simulation builds dynamical models to mimic the structure and functions of the brain, while brain-inspired computing (BIC) develops intelligent systems by learning from the structure and functions of the brain. The two fields are intertwined and should share a common programming framework to facilitate each other's development. However, none of the existing software in the fields can achieve this goal, because traditional brain simulators lack differentiability for training, while existing deep learning (DL) frameworks fail to capture the biophysical realism and complexity of brain dynamics. In this paper, we introduce BrainPy, a differentiable brain simulator developed using JAX and XLA, with the aim of bridging the gap between brain simulation and BIC. BrainPy expands upon the functionalities of JAX, a powerful AI framework, by introducing complete capabilities for flexible, efficient, and scalable brain simulation. It offers a range of sparse and event-driven operators for efficient and scalable brain simulation, an abstraction for managing the intricacies of synaptic computations, a modular and flexible interface for constructing multi-scale brain models, and an object-oriented just-in-time compilation approach to handle the memory-intensive nature of brain dynamics. We showcase the efficiency and scalability of BrainPy on benchmark tasks, highlight its differentiable simulation for biologically plausible spiking models, and discuss its potential to support research at the intersection of brain simulation and BIC.

Neurosymbolic approaches leveraging Large Language Models (LLMs) with formal methods have recently achieved strong results on mathematics-oriented theorem-proving benchmarks. However, success on competition-style mathematics does not by itself demonstrate the ability to construct proofs about real-world implementations. We address this gap with a benchmark derived from an industrial cryptographic library whose assembly routines are already verified in HOL Light. s2n-bignum is a library used at AWS for providing fast assembly routines for cryptography, and its correctness is established by formal verification. The task of formally verifying this library has been a significant achievement for the Automated Reasoning Group. It involved two tasks: (1) precisely specifying the correct behavior of a program as a mathematical proposition, and (2) proving that the proposition is correct. In the case of s2n-bignum, both tasks were carried out by human experts. In s2n-bignum-bench, we provide the formal specification and ask the LLM to generate a proof script that is accepted by HOL Light within a fixed proof-check timeout. To our knowledge, s2n-bignum-bench is the first public benchmark focused on machine-checkable proof synthesis for industrial low-level cryptographic assembly routines in HOL Light. This benchmark provides a challenging and practically relevant testbed for evaluating LLM-based theorem proving beyond competition mathematics. The code to set up and use the benchmark is available here: https://github.com/kings-crown/s2n-bignum-bench{s2n-bignum-bench}.

Can large language models (LLMs) implement computations of psychopathology? An effective approach to the question hinges on addressing two factors. First, for conceptual validity, we require a general and computational account of psychopathology that is applicable to computational entities without biological embodiment or subjective experience. Second, mechanisms underlying LLM behaviors need to be studied for better methodological validity. Thus, we establish a computational-theoretical framework to provide an account of psychopathology applicable to LLMs. To ground the theory for empirical analysis, we also propose a novel mechanistic interpretability method alongside a tailored empirical analytic framework. Based on the frameworks, we conduct experiments demonstrating three key claims: first, that distinct dysfunctional and problematic representational states are implemented in LLMs; second, that their activations can spread and self-sustain to trap LLMs; and third, that dynamic, cyclic structural causal models encoded in the LLMs underpin these patterns. In concert, the empirical results corroborate our hypothesis that network-theoretic computations of psychopathology have already emerged in LLMs. This suggests that certain LLM behaviors mirroring psychopathology may not be a superficial mimicry but a feature of their internal processing. Thus, our work alludes to the possibility of AI systems with psychopathological behaviors in the near future.

Modern recording techniques enable neuroscientists to simultaneously study neural activity across large populations of neurons, with capturing predictor-dependent correlations being a fundamental challenge in neuroscience. Moreover, the fact that input covariates often lie in restricted subdomains, according to experimental settings, makes inference even more challenging. To address these challenges, we propose a set of nonparametric mean-covariance regression models for high-dimensional neural activity with restricted inputs. These models reduce the dimensionality of neural responses by employing a lower-dimensional latent factor model, where both factor loadings and latent factors are predictor-dependent, to jointly model mean and covariance across covariates. The smoothness of neural activity across experimental conditions is modeled nonparametrically using two Gaussian processes (GPs), applied to both loading basis and latent factors. Additionally, to account for the covariates lying in restricted subspace, we incorporate graph information into the covariance structure. To flexibly infer the model, we use an MCMC algorithm to sample from posterior distributions. After validating and studying the properties of proposed methods by simulations, we apply them to two neural datasets (local field potential and neural spiking data) to demonstrate the usage of models for continuous and counting observations. Overall, the proposed methods provide a framework to jointly model covariate-dependent mean and covariance in high dimensional neural data, especially when the covariates lie in restricted domains. The framework is general and can be easily adapted to various applications beyond neuroscience.

Modeling the interplay between external stimuli and internal neural representations is a pivotal research area for Brain-Computer Interfaces (BCIs). A major limitation of prior work is the prevailing paradigm of specialized, single-task models, which curtails versatility and neglects inter-task synergies. To address this, we propose Mind-Omni, the first versatile framework that unifies seven distinct encoding and decoding tasks through a discrete diffusion paradigm. At its core is a novel Brain Tokenizer that transforms heterogeneous, continuous brain signals into standardized, discrete tokens. This enables direct, token-level interactions for mutual understanding and generation between any two or more modalities within a shared semantic space. To unlock advanced reasoning capabilities, we further curate a specialized Brain Question Answering (BQA) instruction-tuning dataset. Our model not only establishes a new state-of-the-art among multi-task unified frameworks but also provides strong evidence for multi-task synergy. By demonstrating performance competitive with, and at times superior to, larger specialized models, our work offers a powerful new paradigm for neural modeling and paves the way for foundation models of neural activity. The code is publicly available at https://github.com/ReedOnePeck/Mind-Omni.

Electroencephalography (EEG) foundation models have recently emerged as a promising paradigm for brain-computer interfaces (BCIs), aiming to learn transferable neural representations from large-scale heterogeneous recordings. Despite rapid progresses, there lacks fair and comprehensive comparisons of existing EEG foundation models, due to inconsistent pre-training objectives, preprocessing choices, and downstream evaluation protocols. This paper fills this gap. We first review 50 representative models and organize their design choices into a unified taxonomic framework including data standardization, model architectures, and self-supervised pre-training strategies. We then evaluate 12 open-source foundation models and competitive specialist baselines across 13 EEG datasets spanning nine BCI paradigms. Emphasizing real-world deployments, we consider both cross-subject generalization under a leave-one-subject-out protocol and rapid calibration under a within-subject few-shot setting. We further compare full-parameter fine-tuning with linear probing to assess the transferability of pre-trained representations, and examine the relationship between model scale and downstream performance. Our results indicate that: 1) linear probing is frequently insufficient; 2) specialist models trained from scratch remain competitive across many tasks; and, 3) larger foundation models do not necessarily yield better generalization performance under current data regimes and training practices.

To handle the scarcity and heterogeneity of electroencephalography (EEG) data for Brain-Computer Interface (BCI) tasks, and to harness the power of large publicly available data sets, we propose Neuro-GPT, a foundation model consisting of an EEG encoder and a GPT model. The foundation model is pre-trained on a large-scale data set using a self-supervised task that learns how to reconstruct masked EEG segments. We then fine-tune the model on a Motor Imagery Classification task to validate its performance in a low-data regime (9 subjects). Our experiments demonstrate that applying a foundation model can significantly improve classification performance compared to a model trained from scratch, which provides evidence for the generalizability of the foundation model and its ability to address challenges of data scarcity and heterogeneity in EEG. The code is publicly available at github.com/wenhui0206/NeuroGPT.

This study introduces BrainTransformers, an innovative Large Language Model (LLM) implemented using Spiking Neural Networks (SNN). Our key contributions include: (1) designing SNN-compatible Transformer components such as SNNMatmul, SNNSoftmax, and SNNSiLU; (2) implementing an SNN approximation of the SiLU activation function; and (3) developing a Synapsis module to simulate synaptic plasticity. Our 3-billion parameter model, BrainTransformers-3B-Chat, demonstrates competitive performance across various benchmarks, including MMLU (63.2), BBH (54.1), ARC-C (54.3), and GSM8K (76.3), while potentially offering improved energy efficiency and biological plausibility. The model employs a three-stage training approach, including SNN-specific neuronal synaptic plasticity training. This research opens new avenues for brain-like AI systems in natural language processing and neuromorphic computing. Future work will focus on hardware optimization, developing specialized SNN fine-tuning tools, and exploring practical applications in energy-efficient computing environments.

The development of foundation models for functional magnetic resonance imaging (fMRI) time series holds significant promise for predicting phenotypes related to disease and cognition. Current models, however, are often trained using a mask-and-reconstruct objective on small brain regions. This focus on low-level information leads to representations that are sensitive to noise and temporal fluctuations, necessitating extensive fine-tuning for downstream tasks. We introduce Brain-Semantoks, a self-supervised framework designed specifically to learn abstract representations of brain dynamics. Its architecture is built on two core innovations: a semantic tokenizer that aggregates noisy regional signals into robust tokens representing functional networks, and a self-distillation objective that enforces representational stability across time. We show that this objective is stabilized through a novel training curriculum, ensuring the model robustly learns meaningful features from low signal-to-noise time series. We demonstrate that learned representations enable strong performance on a variety of downstream tasks even when only using a linear probe. Furthermore, we provide comprehensive scaling analyses indicating more unlabeled data reliably results in out-of-distribution performance gains without domain adaptation.

Recent progress in task-optimized neural networks has established encoding models as a powerful tool for predicting brain responses to naturalistic stimuli, yet most existing approaches rely on unimodal representations. The emergence of omni-modal foundation models and rich multimodal neural datasets enables encoding models that jointly integrate visual, auditory, and linguistic information across subjects. We introduce MIRAGE, a brain encoding framework for predicting whole-brain fMRI responses to naturalistic audiovisual stimuli. MIRAGE achieves state-of-the-art performance via a native multimodal backbone and adaptive feature gating across layers. These representations are then combined with a transformer-based brain encoder and a subject-specific linear head over the cortical parcels. Controlled comparisons show that natively multimodal features consistently outperform post-hoc aggregation of independent unimodal features, across architectural levels and backbones. Beyond predictive accuracy, the learned attention weights are directly inspectable to interpret the modality-specific gating profile over the backbone, and each modality traces a distinct anatomical pattern across cortex. Together, these results propose adaptive layer-wise aggregation of natively multimodal features as a generalizable, interpretable, and accurate approach for whole-brain encoding.

Understanding how the brain represents visual information is a fundamental challenge in neuroscience and artificial intelligence. While AI-driven decoding of neural data has provided insights into the human visual system, integrating multimodal neuroimaging signals, such as EEG, MEG, and fMRI, remains a critical hurdle due to their inherent spatiotemporal misalignment. Current approaches often analyze these modalities in isolation, limiting a holistic view of neural representation. In this study, we introduce BrainFLORA, a unified framework for integrating cross-modal neuroimaging data to construct a shared neural representation. Our approach leverages multimodal large language models (MLLMs) augmented with modality-specific adapters and task decoders, achieving state-of-the-art performance in joint-subject visual retrieval task and has the potential to extend multitasking. Combining neuroimaging analysis methods, we further reveal how visual concept representations align across neural modalities and with real world object perception. We demonstrate that the brain's structured visual concept representations exhibit an implicit mapping to physical-world stimuli, bridging neuroscience and machine learning from different modalities of neural imaging. Beyond methodological advancements, BrainFLORA offers novel implications for cognitive neuroscience and brain-computer interfaces (BCIs). Our code is available at https://github.com/ncclab-sustech/BrainFLORA.

Understanding how the human brain represents visual concepts, and in which brain regions these representations are encoded, remains a long-standing challenge. Decades of work have advanced our understanding of visual representations, yet brain signals remain large and complex, and the space of possible visual concepts is vast. As a result, most studies remain small-scale, rely on manual inspection, focus on specific regions and properties, and rarely include systematic validation. We present a large-scale, automated framework for discovering and explaining visual representations across the human cortex. Our method comprises two main stages. First, we discover candidate interpretable patterns in fMRI activity through unsupervised, data-driven decomposition methods. Next, we explain each pattern by identifying the set of natural images that most strongly elicit it and generating a natural-language description of their shared visual meaning. To scale this process, we introduce an automated pipeline that tests multiple candidate explanations, assigns quantitative reliability scores, and selects the most consistent description for each voxel pattern. Our framework reveals thousands of interpretable patterns spanning many distinct visual concepts, including fine-grained representations previously unreported.

Insufficient data is a long-standing challenge for Brain-Computer Interface (BCI) to build a high-performance deep learning model. Though numerous research groups and institutes collect a multitude of EEG datasets for the same BCI task, sharing EEG data from multiple sites is still challenging due to the heterogeneity of devices. The significance of this challenge cannot be overstated, given the critical role of data diversity in fostering model robustness. However, existing works rarely discuss this issue, predominantly centering their attention on model training within a single dataset, often in the context of inter-subject or inter-session settings. In this work, we propose a hierarchical personalized Federated Learning EEG decoding (FLEEG) framework to surmount this challenge. This innovative framework heralds a new learning paradigm for BCI, enabling datasets with disparate data formats to collaborate in the model training process. Each client is assigned a specific dataset and trains a hierarchical personalized model to manage diverse data formats and facilitate information exchange. Meanwhile, the server coordinates the training procedure to harness knowledge gleaned from all datasets, thus elevating overall performance. The framework has been evaluated in Motor Imagery (MI) classification with nine EEG datasets collected by different devices but implementing the same MI task. Results demonstrate that the proposed frame can boost classification performance up to 16.7% by enabling knowledge sharing between multiple datasets, especially for smaller datasets. Visualization results also indicate that the proposed framework can empower the local models to put a stable focus on task-related areas, yielding better performance. To the best of our knowledge, this is the first end-to-end solution to address this important challenge.

Nearby neurons in cortex share similar response profiles, producing systematic spatial organization across sensory and cognitive systems. Recent topographic models reproduce aspects of this structure but remain unimodal and spatially constrain each layer separately, yielding fragmented maps that capture neither the contiguity of cortical processing streams nor their integration across modalities. We introduce Topo-Omni, a topographic multimodal model in which visual, auditory, and language/cognitive processing share a single contiguous in-silico sheet. Built by fine-tuning a pretrained foundation model with a spatial smoothness objective, this architecture develops clusters across modalities that are consistent with human neuroimaging, from sensory to cognitive systems. Driving or suppressing a cluster selectively biases or impairs perception, paralleling human intervention studies. Finally, we use our model to screen for novel clusters in-silico and discover new natural landscape and animal networks which we validate in human data. A single spatial principle thus organizes representations across modalities and processing stages, yielding testable hypotheses about cortical organization.

The ubiquitous independence assumption among symbolic concepts in neurosymbolic (NeSy) predictors is a convenient simplification: NeSy predictors use it to speed up probabilistic reasoning. Recent works like van Krieken et al. (2024) and Marconato et al. (2024) argued that the independence assumption can hinder learning of NeSy predictors and, more crucially, prevent them from correctly modelling uncertainty. There is, however, scepticism in the NeSy community around the scenarios in which the independence assumption actually limits NeSy systems (Faronius and Dos Martires, 2025). In this work, we settle this question by formally showing that assuming independence among symbolic concepts entails that a model can never represent uncertainty over certain concept combinations. Thus, the model fails to be aware of reasoning shortcuts, i.e., the pathological behaviour of NeSy predictors that predict correct downstream tasks but for the wrong reasons.

Functional magnetic resonance imaging (fMRI) is an indispensable tool in modern neuroscience, providing a non-invasive window into whole-brain dynamics at millimeter-scale spatial resolution. However, fMRI is constrained by issues such as high operation costs and immobility. With the rapid advancements in cross-modality synthesis and brain decoding, the use of deep neural networks has emerged as a promising solution for inferring whole-brain, high-resolution fMRI features directly from electroencephalography (EEG), a more widely accessible and portable neuroimaging modality. Nonetheless, the complex projection from neural activity to fMRI hemodynamic responses and the spatial ambiguity of EEG pose substantial challenges both in modeling and interpretability. Relatively few studies to date have developed approaches for EEG-fMRI translation, and although they have made significant strides, the inference of fMRI signals in a given study has been limited to a small set of brain areas and to a single condition (i.e., either resting-state or a specific task). The capability to predict fMRI signals in other brain areas, as well as to generalize across conditions, remain critical gaps in the field. To tackle these challenges, we introduce a novel and generalizable framework: NeuroBOLT, i.e., Neuro-to-BOLD Transformer, which leverages multi-dimensional representation learning from temporal, spatial, and spectral domains to translate raw EEG data to the corresponding fMRI activity signals across the brain. Our experiments demonstrate that NeuroBOLT effectively reconstructs unseen resting-state fMRI signals from primary sensory, high-level cognitive areas, and deep subcortical brain regions, achieving state-of-the-art accuracy with the potential to generalize across varying conditions and sites, which significantly advances the integration of these two modalities.

Bayesian models of cognition have gained considerable traction in computational neuroscience and psychiatry. Their scopes are now expected to expand rapidly to artificial intelligence, providing general inference frameworks to support embodied, adaptable, and energy-efficient autonomous agents. A central theory in this domain is predictive coding, which posits that learning and behaviour are driven by hierarchical probabilistic inferences about the causes of sensory inputs. Biological realism constrains these networks to rely on simple local computations in the form of precision-weighted predictions and prediction errors. This can make this framework highly efficient, but its implementation comes with unique challenges on the software development side. Embedding such models in standard neural network libraries often becomes limiting, as these libraries' compilation and differentiation backends can force a conceptual separation between optimization algorithms and the systems being optimized. This critically departs from other biological principles such as self-monitoring, self-organisation, cellular growth and functional plasticity. In this paper, we introduce pyhgf: a Python package backed by JAX and Rust for creating, manipulating and sampling dynamic networks for predictive coding. We improve over other frameworks by enclosing the network components as transparent, modular and malleable variables in the message-passing steps. The resulting graphs can implement arbitrary computational complexities as beliefs propagation. But the transparency of core variables can also translate into inference processes that leverage self-organisation principles, and express structure learning, meta-learning or causal discovery as the consequence of network structural adaptation to surprising inputs. The code, tutorials and documentation are hosted at: https://github.com/ilabcode/pyhgf.